BLASTX nr result

ID: Coptis24_contig00036726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036726
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/93 (35%), Positives = 48/93 (51%)
 Frame = -1

Query: 288 TLWVKWVHNNLIKGRNFWQLKVPQXXXXXXXXXXXXRKEVSDIIMHQIGDGHHTKFWLDP 109
           ++W  W+ +NL++GRNFW +K PQ            R      + + IGDG  T  W D 
Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247

Query: 108 WHPAGILIDFFPQALIHDSSCRLNSPVSSLIRN 10
           WHP   L D + +  I+DS    N+ V+ LI+N
Sbjct: 248 WHPHSPLADSYGERFIYDSGMAKNAKVNVLIQN 280


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/85 (36%), Positives = 43/85 (50%)
 Frame = -1

Query: 264  NNLIKGRNFWQLKVPQXXXXXXXXXXXXRKEVSDIIMHQIGDGHHTKFWLDPWHPAGILI 85
            +NL++GRNFW +K PQ            R      + + IGDG  T  W D WHP   L 
Sbjct: 1069 SNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLA 1128

Query: 84   DFFPQALIHDSSCRLNSPVSSLIRN 10
            D + +  I+DS    N+ V+ LI+N
Sbjct: 1129 DSYGERFIYDSGMAKNAKVNVLIQN 1153


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/85 (36%), Positives = 43/85 (50%)
 Frame = -1

Query: 264 NNLIKGRNFWQLKVPQXXXXXXXXXXXXRKEVSDIIMHQIGDGHHTKFWLDPWHPAGILI 85
           +NL++GRNFW +K PQ            R      + + IGDG  T  W D WHP   L 
Sbjct: 729 SNLLRGRNFWTIKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLA 788

Query: 84  DFFPQALIHDSSCRLNSPVSSLIRN 10
           D + +  I+DS    N+ V+ LI+N
Sbjct: 789 DSYGERFIYDSGMAKNAKVNVLIQN 813


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