BLASTX nr result

ID: Coptis24_contig00036688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036688
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...    83   3e-14
emb|CBI33069.3| unnamed protein product [Vitis vinifera]               83   3e-14
emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]    83   3e-14
ref|XP_004143409.1| PREDICTED: growth-regulating factor 1-like [...    81   1e-13
ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13

>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/58 (63%), Positives = 44/58 (75%)
 Frame = +3

Query: 60  TGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233
           T +     G+RGPFTPSQW+ELE QALI+KYI AN+PVPSNLLI I + LNP G+  S
Sbjct: 143 TSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGS 200


>emb|CBI33069.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/58 (63%), Positives = 44/58 (75%)
 Frame = +3

Query: 60  TGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233
           T +     G+RGPFTPSQW+ELE QALI+KYI AN+PVPSNLLI I + LNP G+  S
Sbjct: 154 TSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGS 211


>emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]
          Length = 497

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/58 (63%), Positives = 44/58 (75%)
 Frame = +3

Query: 60  TGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233
           T +     G+RGPFTPSQW+ELE QALI+KYI AN+PVPSNLLI I + LNP G+  S
Sbjct: 43  TSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGS 100


>ref|XP_004143409.1| PREDICTED: growth-regulating factor 1-like [Cucumis sativus]
           gi|449499844|ref|XP_004160932.1| PREDICTED:
           growth-regulating factor 1-like [Cucumis sativus]
          Length = 572

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +3

Query: 42  CCRQSCTGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSG 221
           C   S + +   + GIRGPFT SQW+ELE QALI+KY+++N+PVPSNLLI + + L P G
Sbjct: 138 CVSGSYSSMHGPVAGIRGPFTQSQWIELEHQALIYKYLSSNVPVPSNLLIPLKKSLYPYG 197

Query: 222 IP-ESVFSLQPNT 257
           +   S  SL PNT
Sbjct: 198 LTCSSAGSLPPNT 210


>ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|222861441|gb|EEE98983.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +3

Query: 63  GLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233
           G+   +TG+RGPFTPSQW+ELE QALI+KYI A +PVPSNL+I + + + P  +P S
Sbjct: 152 GMHGPLTGVRGPFTPSQWMELEHQALIYKYITARVPVPSNLIIPLKKSVYPYSLPGS 208


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