BLASTX nr result
ID: Coptis24_contig00036688
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036688 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853... 83 3e-14 emb|CBI33069.3| unnamed protein product [Vitis vinifera] 83 3e-14 emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera] 83 3e-14 ref|XP_004143409.1| PREDICTED: growth-regulating factor 1-like [... 81 1e-13 ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|2... 78 9e-13 >ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera] Length = 597 Score = 82.8 bits (203), Expect = 3e-14 Identities = 37/58 (63%), Positives = 44/58 (75%) Frame = +3 Query: 60 TGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233 T + G+RGPFTPSQW+ELE QALI+KYI AN+PVPSNLLI I + LNP G+ S Sbjct: 143 TSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGS 200 >emb|CBI33069.3| unnamed protein product [Vitis vinifera] Length = 558 Score = 82.8 bits (203), Expect = 3e-14 Identities = 37/58 (63%), Positives = 44/58 (75%) Frame = +3 Query: 60 TGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233 T + G+RGPFTPSQW+ELE QALI+KYI AN+PVPSNLLI I + LNP G+ S Sbjct: 154 TSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGS 211 >emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera] Length = 497 Score = 82.8 bits (203), Expect = 3e-14 Identities = 37/58 (63%), Positives = 44/58 (75%) Frame = +3 Query: 60 TGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233 T + G+RGPFTPSQW+ELE QALI+KYI AN+PVPSNLLI I + LNP G+ S Sbjct: 43 TSMHGAFAGVRGPFTPSQWIELEHQALIYKYITANVPVPSNLLIPIRKSLNPFGLSGS 100 >ref|XP_004143409.1| PREDICTED: growth-regulating factor 1-like [Cucumis sativus] gi|449499844|ref|XP_004160932.1| PREDICTED: growth-regulating factor 1-like [Cucumis sativus] Length = 572 Score = 80.9 bits (198), Expect = 1e-13 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Frame = +3 Query: 42 CCRQSCTGLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSG 221 C S + + + GIRGPFT SQW+ELE QALI+KY+++N+PVPSNLLI + + L P G Sbjct: 138 CVSGSYSSMHGPVAGIRGPFTQSQWIELEHQALIYKYLSSNVPVPSNLLIPLKKSLYPYG 197 Query: 222 IP-ESVFSLQPNT 257 + S SL PNT Sbjct: 198 LTCSSAGSLPPNT 210 >ref|XP_002320668.1| predicted protein [Populus trichocarpa] gi|222861441|gb|EEE98983.1| predicted protein [Populus trichocarpa] Length = 607 Score = 77.8 bits (190), Expect = 9e-13 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +3 Query: 63 GLQRVITGIRGPFTPSQWLELEQQALIFKYINANIPVPSNLLISIMRELNPSGIPES 233 G+ +TG+RGPFTPSQW+ELE QALI+KYI A +PVPSNL+I + + + P +P S Sbjct: 152 GMHGPLTGVRGPFTPSQWMELEHQALIYKYITARVPVPSNLIIPLKKSVYPYSLPGS 208