BLASTX nr result

ID: Coptis24_contig00036685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036685
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631973.1| PREDICTED: protein FAM179B-like [Vitis vinif...   119   3e-25
ref|XP_002314385.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002332268.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_003567432.1| PREDICTED: uncharacterized protein LOC100829...   110   1e-22
ref|XP_002459033.1| hypothetical protein SORBIDRAFT_03g044840 [S...   108   6e-22

>ref|XP_003631973.1| PREDICTED: protein FAM179B-like [Vitis vinifera]
           gi|297736855|emb|CBI26056.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/87 (70%), Positives = 71/87 (81%)
 Frame = -1

Query: 262 EEAEKSLLVMVECMPSLALVSKLRAFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLV 83
           EEA+K+L  MV  M  L L+ KL+A+V+H N R+RAKAA+S +HCVSKMGL  MKEFGLV
Sbjct: 172 EEADKALKAMVGSMTPLPLLQKLQAYVNHANLRIRAKAAISISHCVSKMGLEGMKEFGLV 231

Query: 82  SLILIAAELLNDRLPEAREAARRTVTS 2
           SL+ IAAELLNDRLPEAREAAR TV S
Sbjct: 232 SLVQIAAELLNDRLPEAREAARSTVIS 258


>ref|XP_002314385.1| predicted protein [Populus trichocarpa] gi|222863425|gb|EEF00556.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/86 (65%), Positives = 70/86 (81%)
 Frame = -1

Query: 262 EEAEKSLLVMVECMPSLALVSKLRAFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLV 83
           EEA+K+L  MV+ M  L L++KLR +V H NPR+RAKAA++ ++ VSKMGL AM EFGLV
Sbjct: 161 EEADKALNAMVKSMTPLPLLNKLRPYVRHINPRIRAKAAITISNSVSKMGLEAMNEFGLV 220

Query: 82  SLILIAAELLNDRLPEAREAARRTVT 5
           SL+ +AA+LLNDRLPEAREAAR  VT
Sbjct: 221 SLVQMAADLLNDRLPEAREAARNIVT 246


>ref|XP_002332268.1| predicted protein [Populus trichocarpa] gi|222832033|gb|EEE70510.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/87 (64%), Positives = 71/87 (81%)
 Frame = -1

Query: 262 EEAEKSLLVMVECMPSLALVSKLRAFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLV 83
           EEA+++L  MV+ M  L L++KLR +VSH+NP+VRAKAA++ +  VSKMGL  M EFGLV
Sbjct: 159 EEADRALNAMVKSMTPLPLLNKLRPYVSHSNPKVRAKAAITISKSVSKMGLEGMNEFGLV 218

Query: 82  SLILIAAELLNDRLPEAREAARRTVTS 2
           SL+ +AA+LLNDRLPEAREAAR  VTS
Sbjct: 219 SLVQMAADLLNDRLPEAREAARNIVTS 245


>ref|XP_003567432.1| PREDICTED: uncharacterized protein LOC100829589 [Brachypodium
           distachyon]
          Length = 330

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/87 (60%), Positives = 68/87 (78%)
 Frame = -1

Query: 262 EEAEKSLLVMVECMPSLALVSKLRAFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLV 83
           EEAEK++  M   MP L L+ KL+++V H NPRVRAKAAV+ AHC ++M +  MKEFG+ 
Sbjct: 182 EEAEKAMRAMATSMPPLPLLKKLKSYVHHANPRVRAKAAVAMAHCAARMDVETMKEFGMP 241

Query: 82  SLILIAAELLNDRLPEAREAARRTVTS 2
           +L+ ++AELLNDRLPEAREAAR  VTS
Sbjct: 242 ALLQVSAELLNDRLPEAREAARSIVTS 268


>ref|XP_002459033.1| hypothetical protein SORBIDRAFT_03g044840 [Sorghum bicolor]
           gi|241931008|gb|EES04153.1| hypothetical protein
           SORBIDRAFT_03g044840 [Sorghum bicolor]
          Length = 319

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/87 (60%), Positives = 68/87 (78%)
 Frame = -1

Query: 262 EEAEKSLLVMVECMPSLALVSKLRAFVSHTNPRVRAKAAVSFAHCVSKMGLHAMKEFGLV 83
           EEAEK++  M   MP L L+ KL+A+V H N RVRAKAAV+ +HC ++M + AMKEFG+ 
Sbjct: 186 EEAEKAMRAMAASMPPLPLLKKLKAYVHHANLRVRAKAAVAISHCAARMDIEAMKEFGMS 245

Query: 82  SLILIAAELLNDRLPEAREAARRTVTS 2
           +L+ +AAELLNDRLPEAREAAR  V+S
Sbjct: 246 ALLQVAAELLNDRLPEAREAARGVVSS 272


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