BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036682
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]             327   4e-87
ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|1...   318   1e-84
ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl...   316   5e-84
ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1,...   312   1e-82

>gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
          Length = 257

 Score =  327 bits (837), Expect = 4e-87
 Identities = 166/230 (72%), Positives = 190/230 (82%), Gaps = 2/230 (0%)
 Frame = +1

Query: 142 PGSRVLCTCRVQHHTASKVPRRNVLALMLSSVIFQD-GSCDN-ALAQPSVAFREYIDSFD 315
           P +  LCT R Q   AS +PRRN +AL+LS+ IF + G  DN A A+PSV FREYID+FD
Sbjct: 26  PSASCLCTRRNQSFQASSIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVGFREYIDTFD 85

Query: 316 GYSFKYPQNWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKV 495
           GYS KYPQNWI VRGAGADIFFRDP++LDENL              VEDLGPP+ AG+KV
Sbjct: 86  GYSLKYPQNWIQVRGAGADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLGPPEEAGKKV 145

Query: 496 LKQYLTEFMSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIP 675
           LKQYLTEFMSTRLGVRRE++I STSSRVADDGKLYYQ+EVNIKSYAN NELAVMP++R+P
Sbjct: 146 LKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNELAVMPQDRVP 205

Query: 676 RLEWDRRYLSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKV 825
           RLEW+RRYLSVLGVEN +LYELRLQTPE+VF+EEE DLR+VM+SFRV KV
Sbjct: 206 RLEWNRRYLSVLGVENNRLYELRLQTPESVFVEEENDLRQVMDSFRVNKV 255


>ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|222871497|gb|EEF08628.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  323 bits (828), Expect = 4e-86
 Identities = 164/211 (77%), Positives = 177/211 (83%), Gaps = 1/211 (0%)
 Frame = +1

Query: 196 VPRRNVLALMLSSVIFQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGAGAD 372
           VPRRN +AL+LSS +F +   DN A AQ SV FREYID FDGYSFKYPQNWI VRGAGAD
Sbjct: 2   VPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGAD 61

Query: 373 IFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKVLKQYLTEFMSTRLGVRREA 552
           IFFRDPF+LDENL              VEDLGPPQ AG+KVLKQYLTEFMSTRLGVRRE+
Sbjct: 62  IFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRES 121

Query: 553 SIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYLSVLGVENKQL 732
           +I STSSRVADDGKLYYQ+EVNIKSYANNNELAVMP  R+ RLEWDRRYLSVLGVEN QL
Sbjct: 122 NILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQL 181

Query: 733 YELRLQTPENVFLEEEGDLRKVMESFRVFKV 825
           YELRLQTPENVF+EEE DLRKVM+SFRV K+
Sbjct: 182 YELRLQTPENVFVEEENDLRKVMDSFRVNKI 212


>ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|118485159|gb|ABK94442.1|
           unknown [Populus trichocarpa]
           gi|222857851|gb|EEE95398.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  318 bits (816), Expect = 1e-84
 Identities = 170/262 (64%), Positives = 194/262 (74%), Gaps = 5/262 (1%)
 Frame = +1

Query: 58  IPSHSPTSCLNRKATSLLPWLKFAPSAFPGSRVLCTCRVQHHT----ASKVPRRNVLALM 225
           + S  P + L     S   WL  +    P S   C   + H+     A  VPRRN +AL+
Sbjct: 5   LDSFPPPTQLTHPTRSRPTWLSCSMPISPNST--CFSSIPHNKQLTKAFAVPRRNAMALI 62

Query: 226 LSSVIFQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGAGADIFFRDPFILD 402
           LSS IF +   +N A AQ SV FREYID FDGYS K+PQNWI VRGAGADIFFRDPF+LD
Sbjct: 63  LSSYIFSEVGFNNIAFAQRSVGFREYIDQFDGYSLKHPQNWIQVRGAGADIFFRDPFVLD 122

Query: 403 ENLXXXXXXXXXXXXXXVEDLGPPQVAGEKVLKQYLTEFMSTRLGVRREASIRSTSSRVA 582
           ENL              VEDLGPP+ AG+KVLKQYLTEFMSTRLGVRRE++I STSSRVA
Sbjct: 123 ENLSVELSSPSSSNYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNIISTSSRVA 182

Query: 583 DDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYLSVLGVENKQLYELRLQTPEN 762
           DDGKLYYQ+EVNIKSYANNNELAVMP+ R+ RLEW+RRY+SVLGVEN +LYELRLQTPEN
Sbjct: 183 DDGKLYYQVEVNIKSYANNNELAVMPQERVVRLEWNRRYMSVLGVENNRLYELRLQTPEN 242

Query: 763 VFLEEEGDLRKVMESFRVFKVT 828
           VF+EEE DLR+VM+SFRV KVT
Sbjct: 243 VFVEEENDLRQVMDSFRVNKVT 264


>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
           lumenal 21.5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 265

 Score =  316 bits (810), Expect = 5e-84
 Identities = 161/222 (72%), Positives = 183/222 (82%), Gaps = 1/222 (0%)
 Frame = +1

Query: 163 TCRVQHHTASKVPRRNVLALMLSSVIFQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQ 339
           +C+ Q   A  VPRR+ +AL+ SS I  + G   +ALAQ SV FREYID+FDGYSFKYP+
Sbjct: 44  SCKNQPTKAFAVPRRSTMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDGYSFKYPK 103

Query: 340 NWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKVLKQYLTEF 519
           NWI VRGAGADIFFRDP++LDENL              VEDLGPPQ AG+KVLKQYLTEF
Sbjct: 104 NWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKVLKQYLTEF 163

Query: 520 MSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRY 699
           MSTRLGVRRE+ I STSSRVADDGKLYYQ+EVNIKSYANNNE+AVMP++R+ RLEW+RRY
Sbjct: 164 MSTRLGVRRESDILSTSSRVADDGKLYYQVEVNIKSYANNNEMAVMPQDRVVRLEWNRRY 223

Query: 700 LSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKV 825
           LSVLGVEN +LYELRLQTPENVF+EEE DLR+VMESFRV KV
Sbjct: 224 LSVLGVENNRLYELRLQTPENVFVEEENDLRQVMESFRVNKV 265


>ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1, chloroplastic [Vitis
           vinifera]
          Length = 282

 Score =  312 bits (799), Expect = 1e-82
 Identities = 174/282 (61%), Positives = 202/282 (71%), Gaps = 15/282 (5%)
 Frame = +1

Query: 28  MATTLLQTISIP----SHSPTSCLNRKATSLLPWLKFAPSAFPG----------SRVLCT 165
           MAT L   +  P    S S +S   + A S  P + F    FP           SR + +
Sbjct: 1   MATVLNSLLPPPTRRSSSSSSSSSTQPAGSTRPTMSFHYPDFPAPFATTNYSASSRAI-S 59

Query: 166 CRVQHHTASKVPRRNVLALMLSSVIFQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQN 342
           C++Q      V RR+ +AL+ SS IF   G  D ALAQPSV FREYID+FDGYSFKYPQN
Sbjct: 60  CQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGFREYIDTFDGYSFKYPQN 119

Query: 343 WIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKVLKQYLTEFM 522
           WI VRG+GADIFFRDPF+LDENL              VEDLG PQ AG+KVL+QYLTEFM
Sbjct: 120 WIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQPQEAGKKVLQQYLTEFM 179

Query: 523 STRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYL 702
           STRLGVRRE++I STSSRVADDG+ YYQ+EVNIKSYANNNELAVMP +R+ RLEWDRRYL
Sbjct: 180 STRLGVRRESNIVSTSSRVADDGRTYYQVEVNIKSYANNNELAVMPTDRVTRLEWDRRYL 239

Query: 703 SVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKVT 828
           SVLGVEN +LYELRLQTPE+VFLEEE +LR+VM+SFRV K +
Sbjct: 240 SVLGVENNRLYELRLQTPESVFLEEENELRQVMDSFRVNKAS 281