BLASTX nr result

ID: Coptis24_contig00036679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036679
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]               56   3e-06

>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
          Length = 755

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/64 (35%), Positives = 41/64 (64%)
 Frame = -3

Query: 208 DTIVFSSADLRAVDSPHEDTLVSTVAMENYMVKRVLIDCRSAVDLLFRGALEEMGVDLKQ 29
           D ++F  +D   +D PH D LV T+ + ++ V++VL+D  S +D++F   L EM +D+ Q
Sbjct: 325 DEVIFHESDTNGLDRPHNDPLVITLTIGDFNVEQVLVDTGSTLDIVFLTTLREMKIDMTQ 384

Query: 28  LRPS 17
           + P+
Sbjct: 385 IMPT 388


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