BLASTX nr result

ID: Coptis24_contig00036676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036676
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...    63   3e-08
ref|XP_002273621.1| PREDICTED: putative disease resistance prote...    60   2e-07
ref|XP_003615744.1| Cc-nbs-lrr resistance protein [Medicago trun...    59   3e-07
ref|XP_003613508.1| Resistance protein [Medicago truncatula] gi|...    59   5e-07
ref|XP_002277987.1| PREDICTED: putative disease resistance prote...    58   7e-07

>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = +1

Query: 4   WLRKLKDAAYEAEDIMDDCALEFQRTE--SEVGEMSYAEQVSYFLSTFSGFKFVFGHQIG 177
           WL KLKDAAY  +DI+D+CA +    E     G+ S+  Q S+F+S+F      F +++ 
Sbjct: 61  WLLKLKDAAYVLDDILDECATQALEMEYKGSKGKPSHTVQ-SFFVSSFHPKHVAFRYKLA 119

Query: 178 KRIKEVREKFDETDAGISKFHL 243
           K++K +RE+ DE     SKFHL
Sbjct: 120 KKMKRIRERLDEIAEERSKFHL 141


>ref|XP_002273621.1| PREDICTED: putative disease resistance protein RGA1 [Vitis
           vinifera] gi|147842093|emb|CAN62651.1| hypothetical
           protein VITISV_003942 [Vitis vinifera]
          Length = 1129

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/86 (39%), Positives = 52/86 (60%)
 Frame = +1

Query: 4   WLRKLKDAAYEAEDIMDDCALEFQRTESEVGEMSYAEQVSYFLSTFSGFKFVFGHQIGKR 183
           W+R+LKD  Y+A+D+ DD A E  R +++V    +  +VS F S  S  +  F  ++G R
Sbjct: 69  WVRRLKDVVYDADDLFDDLAAEDLRRKTDV-RGRFGRRVSDFFS--SSNQVAFRVKMGHR 125

Query: 184 IKEVREKFDETDAGISKFHLNSGVVS 261
           +KEVRE+ D     ISKF+ N  V++
Sbjct: 126 VKEVRERMDLIANDISKFNFNPRVIT 151


>ref|XP_003615744.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355517079|gb|AES98702.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1090

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/86 (37%), Positives = 46/86 (53%)
 Frame = +1

Query: 1   VWLRKLKDAAYEAEDIMDDCALEFQRTESEVGEMSYAEQVSYFLSTFSGFKFVFGHQIGK 180
           VWL++LKDA Y  +DI+D+C++E  R ++               S F+    VF   IGK
Sbjct: 60  VWLQQLKDAVYVLDDILDECSIESSRLKAS--------------SCFNLKNIVFRRDIGK 105

Query: 181 RIKEVREKFDETDAGISKFHLNSGVV 258
           R+KE+  +FD+      KF L  GVV
Sbjct: 106 RLKEITRRFDQIAESKDKFLLREGVV 131


>ref|XP_003613508.1| Resistance protein [Medicago truncatula]
           gi|355514843|gb|AES96466.1| Resistance protein [Medicago
           truncatula]
          Length = 1125

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
 Frame = +1

Query: 4   WLRKLKDAAYEAEDIMDDCALEFQRTESEVGEMSYAEQV-SYFLSTFSGFKFVFGHQIGK 180
           WL KLKDAAY  +DIMD+CA E    E +  +   + ++ S FLS+F      F +++ K
Sbjct: 65  WLLKLKDAAYTLDDIMDECATEALEMEYKASKCGLSHKMQSSFLSSFHPKHIAFRYKLAK 124

Query: 181 RIKEVREKFDETDAGISKFHL------NSGVV 258
           ++K +    D+  A  +KFHL       SGVV
Sbjct: 125 KMKRIGVWLDDIAAEKNKFHLTEIVRERSGVV 156


>ref|XP_002277987.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 874

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +1

Query: 4   WLRKLKDAAYEAEDIMDDCALE-FQRTESEVGEMSYAEQVSYFLSTFSGFKFVFGHQIGK 180
           WLRKLK A YEAED++DD   E  +R  ++ G  S  +QV  F ST +   F F  ++G+
Sbjct: 65  WLRKLKKALYEAEDVLDDFEYEALRRKVAKAG--SITKQVHSFFSTSNPLPFSF--KMGR 120

Query: 181 RIKEVREKFDETDAGISKFHLNSGVV 258
           ++K ++E+ D+  A  SKF+L    V
Sbjct: 121 KMKNLKERLDKIAADRSKFNLTERAV 146


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