BLASTX nr result

ID: Coptis24_contig00036669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036669
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150141.1| PREDICTED: uncharacterized protein LOC101205...   121   5e-26
ref|XP_002306133.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_003631584.1| PREDICTED: uncharacterized protein LOC100260...   118   4e-25
ref|XP_002266234.1| PREDICTED: uncharacterized protein LOC100260...   118   4e-25
ref|XP_002512983.1| clathrin binding protein, putative [Ricinus ...   117   7e-25

>ref|XP_004150141.1| PREDICTED: uncharacterized protein LOC101205534 [Cucumis sativus]
           gi|449520605|ref|XP_004167324.1| PREDICTED:
           uncharacterized protein LOC101227373 [Cucumis sativus]
          Length = 375

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/84 (73%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
 Frame = +2

Query: 110 MDAIRKQATKIREXXXXXXXXXXXXFG--GYGGSDSVLTDEAELQQHQKLEKLFISTRAG 283
           MDAIRKQATK+RE            FG  GYGGSD+++TDEAEL QHQKLEKL+ISTRAG
Sbjct: 1   MDAIRKQATKLREQVARQQQAVLKQFGAGGYGGSDNIITDEAELHQHQKLEKLYISTRAG 60

Query: 284 KHFQRDVVRSVEGYIVTGSKQVEI 355
           KHFQRD+VR VEGYIVTGSKQVEI
Sbjct: 61  KHFQRDIVRGVEGYIVTGSKQVEI 84


>ref|XP_002306133.1| predicted protein [Populus trichocarpa] gi|222849097|gb|EEE86644.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/84 (73%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
 Frame = +2

Query: 110 MDAIRKQATKIREXXXXXXXXXXXXFG--GYGGSDSVLTDEAELQQHQKLEKLFISTRAG 283
           M+AIRKQATK+RE            FG  GYGGSD+V+TDEAEL QHQKLE+L+ISTRAG
Sbjct: 1   MEAIRKQATKLREQVAKQQQAVLKQFGAGGYGGSDTVITDEAELHQHQKLERLYISTRAG 60

Query: 284 KHFQRDVVRSVEGYIVTGSKQVEI 355
           KHFQRDVVR VEGYIVTGSKQVEI
Sbjct: 61  KHFQRDVVRGVEGYIVTGSKQVEI 84


>ref|XP_003631584.1| PREDICTED: uncharacterized protein LOC100260580 isoform 2 [Vitis
           vinifera]
          Length = 320

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/84 (72%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
 Frame = +2

Query: 110 MDAIRKQATKIREXXXXXXXXXXXXFGG--YGGSDSVLTDEAELQQHQKLEKLFISTRAG 283
           M+AIRKQA+K RE            FGG  YGGSD+V+TDEAELQQHQKLEKL+ISTRAG
Sbjct: 1   MEAIRKQASKFREQVAKQQQAVLKQFGGGGYGGSDNVITDEAELQQHQKLEKLYISTRAG 60

Query: 284 KHFQRDVVRSVEGYIVTGSKQVEI 355
           KHFQRD+VR VEG+IVTGSKQVEI
Sbjct: 61  KHFQRDIVRGVEGFIVTGSKQVEI 84


>ref|XP_002266234.1| PREDICTED: uncharacterized protein LOC100260580 isoform 1 [Vitis
           vinifera] gi|147864615|emb|CAN81938.1| hypothetical
           protein VITISV_028002 [Vitis vinifera]
           gi|297744745|emb|CBI38007.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/84 (72%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
 Frame = +2

Query: 110 MDAIRKQATKIREXXXXXXXXXXXXFGG--YGGSDSVLTDEAELQQHQKLEKLFISTRAG 283
           M+AIRKQA+K RE            FGG  YGGSD+V+TDEAELQQHQKLEKL+ISTRAG
Sbjct: 1   MEAIRKQASKFREQVAKQQQAVLKQFGGGGYGGSDNVITDEAELQQHQKLEKLYISTRAG 60

Query: 284 KHFQRDVVRSVEGYIVTGSKQVEI 355
           KHFQRD+VR VEG+IVTGSKQVEI
Sbjct: 61  KHFQRDIVRGVEGFIVTGSKQVEI 84


>ref|XP_002512983.1| clathrin binding protein, putative [Ricinus communis]
           gi|223547994|gb|EEF49486.1| clathrin binding protein,
           putative [Ricinus communis]
          Length = 371

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/84 (71%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
 Frame = +2

Query: 110 MDAIRKQATKIREXXXXXXXXXXXXFG--GYGGSDSVLTDEAELQQHQKLEKLFISTRAG 283
           M+AIRKQATK+RE            FG  GYGG+D V+TDEAEL QHQKLEKL+ISTRAG
Sbjct: 1   MEAIRKQATKLREQVARQQQAVLKQFGASGYGGADGVITDEAELHQHQKLEKLYISTRAG 60

Query: 284 KHFQRDVVRSVEGYIVTGSKQVEI 355
           KHFQRD+VR VEGYIVTG+KQVEI
Sbjct: 61  KHFQRDIVRGVEGYIVTGAKQVEI 84


Top