BLASTX nr result

ID: Coptis24_contig00036658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036658
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
gb|ABK95302.1| unknown [Populus trichocarpa]                          162   3e-38
ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp....   161   6e-38
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co...   161   6e-38
ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medi...   159   2e-37

>ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/107 (69%), Positives = 89/107 (83%)
 Frame = +1

Query: 1   FDIGGCYILRPLTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEAALEWKENPNKGFAAK 180
           +DI GCYILRP  +SIWEIM+ FFDAEIKKMK+K CYFP  +S + LE +++  +GFA +
Sbjct: 41  YDISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPE 100

Query: 181 VAWVTRSGETDLENHIALRPTSETVMYPSFPKWIRSHRDLPLKLNQW 321
           VAWVT+SG++DLE  IA+RPTSETVMYP F KWIR HRDLPLKLNQW
Sbjct: 101 VAWVTKSGKSDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQW 147


>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/107 (69%), Positives = 89/107 (83%)
 Frame = +1

Query: 1   FDIGGCYILRPLTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEAALEWKENPNKGFAAK 180
           +DI GCYILRP  +SIWEIM+ FFDAEIKKMK+K CYFP  +S + LE +++  +GFA +
Sbjct: 42  YDISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPE 101

Query: 181 VAWVTRSGETDLENHIALRPTSETVMYPSFPKWIRSHRDLPLKLNQW 321
           VAWVT+SG++DLE  IA+RPTSETVMYP F KWIR HRDLPLKLNQW
Sbjct: 102 VAWVTKSGKSDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQW 148


>ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322500|gb|EFH52921.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  161 bits (407), Expect = 6e-38
 Identities = 74/107 (69%), Positives = 90/107 (84%)
 Frame = +1

Query: 1   FDIGGCYILRPLTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEAALEWKENPNKGFAAK 180
           +DI GCYILRP +++IWEIM+ FFDAEIKKMKVK CYFP  +S A LE +++  +GFA +
Sbjct: 66  YDISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPAVLEKEKDHIEGFAPE 125

Query: 181 VAWVTRSGETDLENHIALRPTSETVMYPSFPKWIRSHRDLPLKLNQW 321
           VAWVT+SG++DLE  IA+RPTSETVMYP + KWIR HRDLPLKLNQW
Sbjct: 126 VAWVTKSGKSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQW 172


>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
           gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 501

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/107 (67%), Positives = 89/107 (83%)
 Frame = +1

Query: 1   FDIGGCYILRPLTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEAALEWKENPNKGFAAK 180
           +DI GCYILRP  +SIWE+M+ FFDAEIKKMK+K CYFP  +S + LE +++  +GFA +
Sbjct: 45  YDISGCYILRPWAMSIWEVMQTFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPE 104

Query: 181 VAWVTRSGETDLENHIALRPTSETVMYPSFPKWIRSHRDLPLKLNQW 321
           VAWVT+SG++DLE  IA+RPTSETVMYP + KWIR HRDLPLKLNQW
Sbjct: 105 VAWVTKSGKSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQW 151


>ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
           gi|355501082|gb|AES82285.1| Bifunctional aminoacyl-tRNA
           synthetase [Medicago truncatula]
          Length = 529

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/107 (67%), Positives = 88/107 (82%)
 Frame = +1

Query: 1   FDIGGCYILRPLTVSIWEIMKDFFDAEIKKMKVKQCYFPFLLSEAALEWKENPNKGFAAK 180
           +DI GCYILRP +++IWEIM+ FFD EIKKMK+K CYFP  +S   LE +++  +GFA +
Sbjct: 73  YDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIEGFAPE 132

Query: 181 VAWVTRSGETDLENHIALRPTSETVMYPSFPKWIRSHRDLPLKLNQW 321
           VAWVT+SGE+DLE  IA+RPTSETVMYP + KWIR HRDLPLKLNQW
Sbjct: 133 VAWVTKSGESDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQW 179


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