BLASTX nr result
ID: Coptis24_contig00036646
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036646 (497 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|2... 127 9e-28 ref|XP_004138588.1| PREDICTED: origin recognition complex subuni... 118 4e-25 ref|XP_002283101.1| PREDICTED: origin recognition complex subuni... 118 6e-25 emb|CBI15609.3| unnamed protein product [Vitis vinifera] 118 6e-25 ref|XP_003533607.1| PREDICTED: origin recognition complex subuni... 117 7e-25 >ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|222861576|gb|EEE99118.1| predicted protein [Populus trichocarpa] Length = 536 Score = 127 bits (319), Expect = 9e-28 Identities = 64/90 (71%), Positives = 72/90 (80%) Frame = -2 Query: 496 LAIFQCITSVTEDYAEEESQEVDAIKSGDIGLMSDVLLQLSTLCNANIIIKGGNCPLETS 317 LAIFQCITS + EEE + GD GLMSDVLLQLS+LCNAN IIKGG+CPLE S Sbjct: 447 LAIFQCITSAADSLDEEEHENDVLRVGGDCGLMSDVLLQLSSLCNANFIIKGGSCPLEGS 506 Query: 316 SRYRSTVSEEMALKVARSVNFPLPKYLYRR 227 +RYRSTVSE++ALKVARS+ FPLP YLYRR Sbjct: 507 TRYRSTVSEDLALKVARSLKFPLPNYLYRR 536 >ref|XP_004138588.1| PREDICTED: origin recognition complex subunit 5-like [Cucumis sativus] Length = 536 Score = 118 bits (296), Expect = 4e-25 Identities = 61/91 (67%), Positives = 73/91 (80%), Gaps = 1/91 (1%) Frame = -2 Query: 496 LAIFQCITSVTEDYAEEESQEVDA-IKSGDIGLMSDVLLQLSTLCNANIIIKGGNCPLET 320 LAIFQCITSV E E++ V ++ D LMSDVLLQLS+LCNAN ++KGG+CPLE Sbjct: 446 LAIFQCITSVAEISLEDDQGNVAMDSQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEG 505 Query: 319 SSRYRSTVSEEMALKVARSVNFPLPKYLYRR 227 S+RYRSTVSE+MALKVARS+ FPL KY+YRR Sbjct: 506 STRYRSTVSEDMALKVARSIKFPLSKYMYRR 536 >ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis vinifera] Length = 541 Score = 118 bits (295), Expect = 6e-25 Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 2/91 (2%) Frame = -2 Query: 496 LAIFQCITSVTEDYAEEESQEVDAIKSG--DIGLMSDVLLQLSTLCNANIIIKGGNCPLE 323 LAIFQC+TSV E E+ Q + + +G D GLMSDVLLQLS+LCNAN I KGG+CPLE Sbjct: 450 LAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLE 509 Query: 322 TSSRYRSTVSEEMALKVARSVNFPLPKYLYR 230 S+RYR+T+SE++ALKVARS+ FPL KYLYR Sbjct: 510 GSTRYRATISEDLALKVARSLKFPLSKYLYR 540 >emb|CBI15609.3| unnamed protein product [Vitis vinifera] Length = 524 Score = 118 bits (295), Expect = 6e-25 Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 2/91 (2%) Frame = -2 Query: 496 LAIFQCITSVTEDYAEEESQEVDAIKSG--DIGLMSDVLLQLSTLCNANIIIKGGNCPLE 323 LAIFQC+TSV E E+ Q + + +G D GLMSDVLLQLS+LCNAN I KGG+CPLE Sbjct: 433 LAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLE 492 Query: 322 TSSRYRSTVSEEMALKVARSVNFPLPKYLYR 230 S+RYR+T+SE++ALKVARS+ FPL KYLYR Sbjct: 493 GSTRYRATISEDLALKVARSLKFPLSKYLYR 523 >ref|XP_003533607.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max] Length = 542 Score = 117 bits (294), Expect = 7e-25 Identities = 57/91 (62%), Positives = 74/91 (81%), Gaps = 2/91 (2%) Frame = -2 Query: 496 LAIFQCITSVTEDYAEEESQEVDA--IKSGDIGLMSDVLLQLSTLCNANIIIKGGNCPLE 323 LAIFQC+ SV E+ ++EE Q D ++ G+ GLMSD+LLQLS+LCN+N I KG +CP+E Sbjct: 451 LAIFQCLVSVAEEPSDEEEQNNDGLGVEGGNGGLMSDILLQLSSLCNSNFIFKGRSCPIE 510 Query: 322 TSSRYRSTVSEEMALKVARSVNFPLPKYLYR 230 S+RYRST+SE++ALKVARS+ FPL KYLYR Sbjct: 511 GSTRYRSTISEDLALKVARSLEFPLSKYLYR 541