BLASTX nr result

ID: Coptis24_contig00036646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036646
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_004138588.1| PREDICTED: origin recognition complex subuni...   118   4e-25
ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   118   6e-25
emb|CBI15609.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_003533607.1| PREDICTED: origin recognition complex subuni...   117   7e-25

>ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|222861576|gb|EEE99118.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/90 (71%), Positives = 72/90 (80%)
 Frame = -2

Query: 496 LAIFQCITSVTEDYAEEESQEVDAIKSGDIGLMSDVLLQLSTLCNANIIIKGGNCPLETS 317
           LAIFQCITS  +   EEE +       GD GLMSDVLLQLS+LCNAN IIKGG+CPLE S
Sbjct: 447 LAIFQCITSAADSLDEEEHENDVLRVGGDCGLMSDVLLQLSSLCNANFIIKGGSCPLEGS 506

Query: 316 SRYRSTVSEEMALKVARSVNFPLPKYLYRR 227
           +RYRSTVSE++ALKVARS+ FPLP YLYRR
Sbjct: 507 TRYRSTVSEDLALKVARSLKFPLPNYLYRR 536


>ref|XP_004138588.1| PREDICTED: origin recognition complex subunit 5-like [Cucumis
           sativus]
          Length = 536

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/91 (67%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
 Frame = -2

Query: 496 LAIFQCITSVTEDYAEEESQEVDA-IKSGDIGLMSDVLLQLSTLCNANIIIKGGNCPLET 320
           LAIFQCITSV E   E++   V    ++ D  LMSDVLLQLS+LCNAN ++KGG+CPLE 
Sbjct: 446 LAIFQCITSVAEISLEDDQGNVAMDSQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEG 505

Query: 319 SSRYRSTVSEEMALKVARSVNFPLPKYLYRR 227
           S+RYRSTVSE+MALKVARS+ FPL KY+YRR
Sbjct: 506 STRYRSTVSEDMALKVARSIKFPLSKYMYRR 536


>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -2

Query: 496 LAIFQCITSVTEDYAEEESQEVDAIKSG--DIGLMSDVLLQLSTLCNANIIIKGGNCPLE 323
           LAIFQC+TSV E    E+ Q  + + +G  D GLMSDVLLQLS+LCNAN I KGG+CPLE
Sbjct: 450 LAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLE 509

Query: 322 TSSRYRSTVSEEMALKVARSVNFPLPKYLYR 230
            S+RYR+T+SE++ALKVARS+ FPL KYLYR
Sbjct: 510 GSTRYRATISEDLALKVARSLKFPLSKYLYR 540


>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/91 (65%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -2

Query: 496 LAIFQCITSVTEDYAEEESQEVDAIKSG--DIGLMSDVLLQLSTLCNANIIIKGGNCPLE 323
           LAIFQC+TSV E    E+ Q  + + +G  D GLMSDVLLQLS+LCNAN I KGG+CPLE
Sbjct: 433 LAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLE 492

Query: 322 TSSRYRSTVSEEMALKVARSVNFPLPKYLYR 230
            S+RYR+T+SE++ALKVARS+ FPL KYLYR
Sbjct: 493 GSTRYRATISEDLALKVARSLKFPLSKYLYR 523


>ref|XP_003533607.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 542

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/91 (62%), Positives = 74/91 (81%), Gaps = 2/91 (2%)
 Frame = -2

Query: 496 LAIFQCITSVTEDYAEEESQEVDA--IKSGDIGLMSDVLLQLSTLCNANIIIKGGNCPLE 323
           LAIFQC+ SV E+ ++EE Q  D   ++ G+ GLMSD+LLQLS+LCN+N I KG +CP+E
Sbjct: 451 LAIFQCLVSVAEEPSDEEEQNNDGLGVEGGNGGLMSDILLQLSSLCNSNFIFKGRSCPIE 510

Query: 322 TSSRYRSTVSEEMALKVARSVNFPLPKYLYR 230
            S+RYRST+SE++ALKVARS+ FPL KYLYR
Sbjct: 511 GSTRYRSTISEDLALKVARSLEFPLSKYLYR 541


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