BLASTX nr result

ID: Coptis24_contig00036641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036641
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    70   4e-12
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    67   3e-11
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-08
ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-08

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 70.1 bits (170), Expect(2) = 4e-12
 Identities = 36/98 (36%), Positives = 50/98 (51%)
 Frame = +3

Query: 75  SAQFIRAHVTILATSQVFHLTTVYGSNNRTERLILWEDLINLHNSFSGPWCVAGDFNNVL 254
           S+Q++   V  L     F LT VY  N    R +LW+DL  +H    GPWCV GDFNNV 
Sbjct: 426 SSQYVHVGVYNLQGEFKFWLTAVYALNQLDRRKVLWKDLEAIHKHQQGPWCVIGDFNNVT 485

Query: 255 FSHERISSELVYPRETTPFANCLNSVSLYDHKSSGCFY 368
            + +RI  + V   E     N + +  L +  ++G FY
Sbjct: 486 KAQDRIGGKAVTESEYIDLLNMMETTCLAEMDTTGEFY 523



 Score = 25.8 bits (55), Expect(2) = 4e-12
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 14  SGRIWLSWDSSVVAVHKIFGECS 82
           +GR+W+ WD+S + V  +  +CS
Sbjct: 406 NGRLWIEWDNSKIDVRHV--KCS 426


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 67.0 bits (162), Expect(2) = 3e-11
 Identities = 34/95 (35%), Positives = 48/95 (50%)
 Frame = +3

Query: 75  SAQFIRAHVTILATSQVFHLTTVYGSNNRTERLILWEDLINLHNSFSGPWCVAGDFNNVL 254
           S+Q++   V  L     F LT VY  N    R +LW+DL  +H    GPWCV GDFNNV 
Sbjct: 366 SSQYVHVGVYNLQGEFKFWLTAVYALNQLDRRKVLWKDLEAIHKHQQGPWCVIGDFNNVT 425

Query: 255 FSHERISSELVYPRETTPFANCLNSVSLYDHKSSG 359
            + +RI  + V   E     N + +  L +  ++G
Sbjct: 426 KAQDRIGGKAVTESEYIDLLNMMETTGLAEMDTTG 460



 Score = 25.8 bits (55), Expect(2) = 3e-11
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 14  SGRIWLSWDSSVVAVHKIFGECS 82
           +GR+W+ WD+S + V  +  +CS
Sbjct: 346 NGRLWIEWDNSKIDVRHV--KCS 366


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 58.9 bits (141), Expect(2) = 4e-08
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +3

Query: 75  SAQFIRAHVTILATSQVFHLTTVYGSNNRTERLILWEDLINLHNSF-SGPWCVAGDFNNV 251
           S Q I   VTILAT+  F+ + +YG NN + R  LW D+++  + + S PW + GDFN +
Sbjct: 610 SDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAI 669

Query: 252 LFSHERISSELVYPRETTPFANCLNSVSLYDHKSSGCFY 368
               +R+     +         C+    + D + SG  Y
Sbjct: 670 RNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHY 708



 Score = 23.1 bits (48), Expect(2) = 4e-08
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 17  GRIWLSWDSSVVAVHKIFG 73
           GRIW+ W++  V V  +FG
Sbjct: 591 GRIWVCWNADTVKV-DVFG 608


>ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 58.9 bits (141), Expect(2) = 4e-08
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +3

Query: 75  SAQFIRAHVTILATSQVFHLTTVYGSNNRTERLILWEDLINLHNSF-SGPWCVAGDFNNV 251
           S Q I   VTILAT+  F+ + +YG NN + R  LW D+++  + + S PW + GDFN +
Sbjct: 403 SDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAI 462

Query: 252 LFSHERISSELVYPRETTPFANCLNSVSLYDHKSSGCFY 368
               +R+     +         C+    + D + SG  Y
Sbjct: 463 RNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHY 501



 Score = 23.1 bits (48), Expect(2) = 4e-08
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 17  GRIWLSWDSSVVAVHKIFG 73
           GRIW+ W++  V V  +FG
Sbjct: 384 GRIWVCWNADTVKV-DVFG 401


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 58.2 bits (139), Expect(2) = 4e-08
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = +3

Query: 75  SAQFIRAHVTILATSQVFHLTTVYGSNNRTERLILWEDLINLHNSF-SGPWCVAGDFNNV 251
           S Q I   VTILAT+  F+ + +YG NN + R  LW D+++  + + S PW + GDFN +
Sbjct: 70  SDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAI 129

Query: 252 LFSHERISSELVYPRETTPFANCLNSVSLYDHKSSGCFY 368
                R+     +         C+    + D + SG  Y
Sbjct: 130 RNQSHRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHY 168



 Score = 23.9 bits (50), Expect(2) = 4e-08
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 17  GRIWLSWDSSVVAVHKIFG 73
           GRIW+ W++  V V+ +FG
Sbjct: 51  GRIWVCWNADTVKVN-VFG 68