BLASTX nr result
ID: Coptis24_contig00036618
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036618 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536936.1| PREDICTED: nephrocystin-3-like [Glycine max] 68 8e-18 ref|XP_003542417.1| PREDICTED: nephrocystin-3-like [Glycine max] 68 1e-17 ref|XP_002881166.1| tetratricopeptide repeat-containing protein ... 68 3e-17 ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin... 70 6e-17 ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sati... 70 6e-17 >ref|XP_003536936.1| PREDICTED: nephrocystin-3-like [Glycine max] Length = 615 Score = 68.2 bits (165), Expect(2) = 8e-18 Identities = 31/59 (52%), Positives = 42/59 (71%) Frame = +1 Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291 EL+ P AAQM A+A +IMD S+G + D +E C NLSK YG +GSY A+EF Q+++D Sbjct: 502 ELDRPQSAAQMFAVAKDIMDTSLGPHHADTIESCQNLSKAYGEMGSYVLAIEFQQQVVD 560 Score = 47.0 bits (110), Expect(2) = 8e-18 Identities = 21/31 (67%), Positives = 23/31 (74%) Frame = +3 Query: 18 G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110 G IPYLE AA+ LK SFGPKHFG+GYI Sbjct: 462 GKVQQAIPYLESAAERLKDSFGPKHFGVGYI 492 >ref|XP_003542417.1| PREDICTED: nephrocystin-3-like [Glycine max] Length = 616 Score = 67.8 bits (164), Expect(2) = 1e-17 Identities = 31/59 (52%), Positives = 42/59 (71%) Frame = +1 Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291 EL+ P AAQM A+A +IMD S+G + D +E C NLSK YG +GSY A+EF Q+++D Sbjct: 503 ELDRPQSAAQMFAVAKDIMDTSLGPHHADTIEACQNLSKAYGEMGSYVLAIEFQQQVVD 561 Score = 47.0 bits (110), Expect(2) = 1e-17 Identities = 21/31 (67%), Positives = 23/31 (74%) Frame = +3 Query: 18 G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110 G IPYLE AA+ LK SFGPKHFG+GYI Sbjct: 463 GKVQQAIPYLESAAERLKDSFGPKHFGVGYI 493 >ref|XP_002881166.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327005|gb|EFH57425.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 616 Score = 67.8 bits (164), Expect(2) = 3e-17 Identities = 31/59 (52%), Positives = 44/59 (74%) Frame = +1 Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291 EL P AAQM A+A +IMDVS+G ++ D+++ C NLSK Y +G+Y+ AVEF QR++D Sbjct: 510 ELGRPQSAAQMFAVAKDIMDVSLGPNHVDSIDACQNLSKAYAGMGNYSLAVEFQQRVID 568 Score = 45.4 bits (106), Expect(2) = 3e-17 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +3 Query: 18 G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110 G S +PYLE AA+ LK+SFG KHFG+GY+ Sbjct: 470 GRVSQAVPYLESAAERLKESFGAKHFGVGYV 500 >ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Cucumis sativus] Length = 634 Score = 69.7 bits (169), Expect(2) = 6e-17 Identities = 32/59 (54%), Positives = 45/59 (76%) Frame = +1 Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291 EL P AAQM A+A +IMDVS+G + D++E C NLSK YG++GSYA A+EF ++++D Sbjct: 513 ELERPQSAAQMFAVAKDIMDVSLGPHHADSIEACHNLSKAYGAMGSYALAIEFQEQVVD 571 Score = 42.4 bits (98), Expect(2) = 6e-17 Identities = 19/31 (61%), Positives = 22/31 (70%) Frame = +3 Query: 18 G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110 G IPYLE AA+ LK+SFG HFG+GYI Sbjct: 473 GKVQEAIPYLEGAAETLKESFGSNHFGVGYI 503 >ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sativus] Length = 634 Score = 69.7 bits (169), Expect(2) = 6e-17 Identities = 32/59 (54%), Positives = 45/59 (76%) Frame = +1 Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291 EL P AAQM A+A +IMDVS+G + D++E C NLSK YG++GSYA A+EF ++++D Sbjct: 513 ELERPQSAAQMFAVAKDIMDVSLGPHHADSIEACHNLSKAYGAMGSYALAIEFQEQVVD 571 Score = 42.4 bits (98), Expect(2) = 6e-17 Identities = 19/31 (61%), Positives = 22/31 (70%) Frame = +3 Query: 18 G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110 G IPYLE AA+ LK+SFG HFG+GYI Sbjct: 473 GKVQEAIPYLEGAAETLKESFGSNHFGVGYI 503