BLASTX nr result

ID: Coptis24_contig00036618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036618
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536936.1| PREDICTED: nephrocystin-3-like [Glycine max]       68   8e-18
ref|XP_003542417.1| PREDICTED: nephrocystin-3-like [Glycine max]       68   1e-17
ref|XP_002881166.1| tetratricopeptide repeat-containing protein ...    68   3e-17
ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin...    70   6e-17
ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sati...    70   6e-17

>ref|XP_003536936.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 615

 Score = 68.2 bits (165), Expect(2) = 8e-18
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = +1

Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291
           EL+ P  AAQM A+A +IMD S+G  + D +E C NLSK YG +GSY  A+EF Q+++D
Sbjct: 502 ELDRPQSAAQMFAVAKDIMDTSLGPHHADTIESCQNLSKAYGEMGSYVLAIEFQQQVVD 560



 Score = 47.0 bits (110), Expect(2) = 8e-18
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = +3

Query: 18  G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110
           G     IPYLE AA+ LK SFGPKHFG+GYI
Sbjct: 462 GKVQQAIPYLESAAERLKDSFGPKHFGVGYI 492


>ref|XP_003542417.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 616

 Score = 67.8 bits (164), Expect(2) = 1e-17
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = +1

Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291
           EL+ P  AAQM A+A +IMD S+G  + D +E C NLSK YG +GSY  A+EF Q+++D
Sbjct: 503 ELDRPQSAAQMFAVAKDIMDTSLGPHHADTIEACQNLSKAYGEMGSYVLAIEFQQQVVD 561



 Score = 47.0 bits (110), Expect(2) = 1e-17
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = +3

Query: 18  G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110
           G     IPYLE AA+ LK SFGPKHFG+GYI
Sbjct: 463 GKVQQAIPYLESAAERLKDSFGPKHFGVGYI 493


>ref|XP_002881166.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327005|gb|EFH57425.1|
           tetratricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score = 67.8 bits (164), Expect(2) = 3e-17
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +1

Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291
           EL  P  AAQM A+A +IMDVS+G ++ D+++ C NLSK Y  +G+Y+ AVEF QR++D
Sbjct: 510 ELGRPQSAAQMFAVAKDIMDVSLGPNHVDSIDACQNLSKAYAGMGNYSLAVEFQQRVID 568



 Score = 45.4 bits (106), Expect(2) = 3e-17
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 18  G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110
           G  S  +PYLE AA+ LK+SFG KHFG+GY+
Sbjct: 470 GRVSQAVPYLESAAERLKESFGAKHFGVGYV 500


>ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Cucumis
           sativus]
          Length = 634

 Score = 69.7 bits (169), Expect(2) = 6e-17
 Identities = 32/59 (54%), Positives = 45/59 (76%)
 Frame = +1

Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291
           EL  P  AAQM A+A +IMDVS+G  + D++E C NLSK YG++GSYA A+EF ++++D
Sbjct: 513 ELERPQSAAQMFAVAKDIMDVSLGPHHADSIEACHNLSKAYGAMGSYALAIEFQEQVVD 571



 Score = 42.4 bits (98), Expect(2) = 6e-17
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +3

Query: 18  G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110
           G     IPYLE AA+ LK+SFG  HFG+GYI
Sbjct: 473 GKVQEAIPYLEGAAETLKESFGSNHFGVGYI 503


>ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sativus]
          Length = 634

 Score = 69.7 bits (169), Expect(2) = 6e-17
 Identities = 32/59 (54%), Positives = 45/59 (76%)
 Frame = +1

Query: 115 ELNEPNKAAQMSAIAMEIMDVSVG*DNEDAMEECDNLSKCYGSIGSYASAVEFLQRLLD 291
           EL  P  AAQM A+A +IMDVS+G  + D++E C NLSK YG++GSYA A+EF ++++D
Sbjct: 513 ELERPQSAAQMFAVAKDIMDVSLGPHHADSIEACHNLSKAYGAMGSYALAIEFQEQVVD 571



 Score = 42.4 bits (98), Expect(2) = 6e-17
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +3

Query: 18  G*TSSGIPYLEKAAKLLKKSFGPKHFGLGYI 110
           G     IPYLE AA+ LK+SFG  HFG+GYI
Sbjct: 473 GKVQEAIPYLEGAAETLKESFGSNHFGVGYI 503


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