BLASTX nr result

ID: Coptis24_contig00036610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036610
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22616.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...    98   8e-19
ref|XP_002513627.1| ATP-binding cassette transporter, putative [...    97   2e-18
ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    91   8e-17
ref|XP_002329680.1| white-brown-complex ABC transporter family [...    91   1e-16

>emb|CBI22616.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -2

Query: 173 RPCTASPPTYILRDISFTAHPSQVLAIVGPSGAGKSTLLDILAARISPTYGTLLLNS 3
           +PCT +PPTYILRDI  TA+PSQVLAIVGPSGAGKSTLLDILAAR SPT G+LLLNS
Sbjct: 49  QPCTTTPPTYILRDICLTAYPSQVLAIVGPSGAGKSTLLDILAARTSPTSGSLLLNS 105


>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -2

Query: 173 RPCTASPPTYILRDISFTAHPSQVLAIVGPSGAGKSTLLDILAARISPTYGTLLLNS 3
           +PCT +PPTYILRDI  TA+PSQVLAIVGPSGAGKSTLLDILAAR SPT G+LLLNS
Sbjct: 41  QPCTTTPPTYILRDICLTAYPSQVLAIVGPSGAGKSTLLDILAARTSPTSGSLLLNS 97


>ref|XP_002513627.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223547535|gb|EEF49030.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 442

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/55 (83%), Positives = 51/55 (92%)
 Frame = -2

Query: 167 CTASPPTYILRDISFTAHPSQVLAIVGPSGAGKSTLLDILAARISPTYGTLLLNS 3
           CT +PPTYILRD+SFTA+PSQ+LAIVGPSGAGKS+LLDILAAR SPT GTLL NS
Sbjct: 64  CTTTPPTYILRDVSFTAYPSQILAIVGPSGAGKSSLLDILAARTSPTSGTLLFNS 118


>ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           8-like [Glycine max]
          Length = 601

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = -2

Query: 167 CTASPPTYILRDISFTAHPSQVLAIVGPSGAGKSTLLDILAARISPTYGTLLLNS 3
           CT +PPTYIL+DIS TA PSQ+LA+VGPSGAGKSTLLDILAAR  P++GTLLLNS
Sbjct: 41  CTNTPPTYILKDISLTALPSQILAVVGPSGAGKSTLLDILAARTLPSHGTLLLNS 95


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/57 (73%), Positives = 51/57 (89%)
 Frame = -2

Query: 173 RPCTASPPTYILRDISFTAHPSQVLAIVGPSGAGKSTLLDILAARISPTYGTLLLNS 3
           + CT +PP+YIL+++S TA+PSQ+LA+VGPSGAGKSTLLDILAAR SPT G LLLNS
Sbjct: 37  KQCTTTPPSYILKEVSLTAYPSQILAVVGPSGAGKSTLLDILAARTSPTSGILLLNS 93