BLASTX nr result

ID: Coptis24_contig00036605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036605
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633838.1| PREDICTED: ABC transporter B family member 1...    95   5e-18
emb|CBI35014.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN63836.1| hypothetical protein VITISV_036111 [Vitis vinifera]    95   5e-18
ref|NP_683599.1| ABC transporter B family member 22 [Arabidopsis...    94   1e-17
dbj|BAB02858.1| multidrug resistance p-glycoprotein; ABC transpo...    94   1e-17

>ref|XP_003633838.1| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1242

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/75 (64%), Positives = 57/75 (76%)
 Frame = -3

Query: 227 QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
           QKQ            ++LLLDEATSALD++SER VQEALDNA +GRTTI+IAH LSTIRN
Sbjct: 494 QKQRIAIARAIIKAPQILLLDEATSALDSESERVVQEALDNAAVGRTTIIIAHRLSTIRN 553

Query: 47  VDLIVVVENGQVAET 3
            D+I VV+NGQ+ ET
Sbjct: 554 ADIITVVQNGQIMET 568



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = -3

Query: 227  QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
            QKQ             VLLLDEATSALD+ SE+ VQ+AL+  ++GRT++V+AH LSTI+N
Sbjct: 1136 QKQRVAIARAILKNPAVLLLDEATSALDSQSEKVVQDALERVMVGRTSVVVAHRLSTIQN 1195

Query: 47   VDLIVVVENGQVAE 6
             DLI V++ G+V E
Sbjct: 1196 CDLIAVLDKGKVVE 1209


>emb|CBI35014.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/75 (64%), Positives = 57/75 (76%)
 Frame = -3

Query: 227 QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
           QKQ            ++LLLDEATSALD++SER VQEALDNA +GRTTI+IAH LSTIRN
Sbjct: 469 QKQRIAIARAIIKAPQILLLDEATSALDSESERVVQEALDNAAVGRTTIIIAHRLSTIRN 528

Query: 47  VDLIVVVENGQVAET 3
            D+I VV+NGQ+ ET
Sbjct: 529 ADIITVVQNGQIMET 543


>emb|CAN63836.1| hypothetical protein VITISV_036111 [Vitis vinifera]
          Length = 815

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/75 (64%), Positives = 57/75 (76%)
 Frame = -3

Query: 227 QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
           QKQ            ++LLLDEATSALD++SER VQEALDNA +GRTTI+IAH LSTIRN
Sbjct: 66  QKQRIAIARAIIKAPQILLLDEATSALDSESERVVQEALDNAAVGRTTIIIAHRLSTIRN 125

Query: 47  VDLIVVVENGQVAET 3
            D+I VV+NGQ+ ET
Sbjct: 126 ADIITVVQNGQIMET 140



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = -3

Query: 227 QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
           QKQ             VLLLDEATSALD+ SE+ VQ+AL+  ++GRT++V+AH LSTI+N
Sbjct: 709 QKQRVAIARAILKNPAVLLLDEATSALDSQSEKVVQDALERVMVGRTSVVVAHRLSTIQN 768

Query: 47  VDLIVVVENGQVAE 6
            DLI V++ G+V E
Sbjct: 769 CDLIAVLDKGKVVE 782


>ref|NP_683599.1| ABC transporter B family member 22 [Arabidopsis thaliana]
           gi|332643921|gb|AEE77442.1| ABC transporter B family
           member 22 [Arabidopsis thaliana]
          Length = 1221

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/75 (66%), Positives = 56/75 (74%)
 Frame = -3

Query: 227 QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
           QKQ             +LLLDEATSALD++SER VQEALDNA IGRTTIVIAH LSTIRN
Sbjct: 481 QKQRISIARAIIKSPTLLLLDEATSALDSESERVVQEALDNATIGRTTIVIAHRLSTIRN 540

Query: 47  VDLIVVVENGQVAET 3
           VD+I V +NGQ+ ET
Sbjct: 541 VDVICVFKNGQIVET 555



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 49/74 (66%)
 Frame = -3

Query: 227  QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
            QKQ             VLLLDEATSALD  SER VQ+AL   ++GRT++VIAH LSTI+N
Sbjct: 1121 QKQRIAIARAVLKNPSVLLLDEATSALDNQSERMVQDALGRLMVGRTSVVIAHRLSTIQN 1180

Query: 47   VDLIVVVENGQVAE 6
             D I V++ G+V E
Sbjct: 1181 CDTITVLDKGKVVE 1194


>dbj|BAB02858.1| multidrug resistance p-glycoprotein; ABC transporter-like protein
           [Arabidopsis thaliana]
          Length = 1262

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/75 (66%), Positives = 56/75 (74%)
 Frame = -3

Query: 227 QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
           QKQ             +LLLDEATSALD++SER VQEALDNA IGRTTIVIAH LSTIRN
Sbjct: 522 QKQRISIARAIIKSPTLLLLDEATSALDSESERVVQEALDNATIGRTTIVIAHRLSTIRN 581

Query: 47  VDLIVVVENGQVAET 3
           VD+I V +NGQ+ ET
Sbjct: 582 VDVICVFKNGQIVET 596



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 49/74 (66%)
 Frame = -3

Query: 227  QKQXXXXXXXXXXXXRVLLLDEATSALDTDSERTVQEALDNALIGRTTIVIAHHLSTIRN 48
            QKQ             VLLLDEATSALD  SER VQ+AL   ++GRT++VIAH LSTI+N
Sbjct: 1162 QKQRIAIARAVLKNPSVLLLDEATSALDNQSERMVQDALGRLMVGRTSVVIAHRLSTIQN 1221

Query: 47   VDLIVVVENGQVAE 6
             D I V++ G+V E
Sbjct: 1222 CDTITVLDKGKVVE 1235


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