BLASTX nr result

ID: Coptis24_contig00036584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036584
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511483.1| hypothetical protein RCOM_1512920 [Ricinus c...    67   2e-09
ref|XP_002322137.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002333015.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002318621.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CBI15308.3| unnamed protein product [Vitis vinifera]               63   2e-08

>ref|XP_002511483.1| hypothetical protein RCOM_1512920 [Ricinus communis]
           gi|223550598|gb|EEF52085.1| hypothetical protein
           RCOM_1512920 [Ricinus communis]
          Length = 609

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   VEDDHKIHLRLPAERKKDQVLVEKSSIHRCSCCGEPLRIKTSFLKPLSIQSQASNGGVPK 181
           V++D    L L A RK + V VEKSSIHRC+CCGEPL+ K+              G   +
Sbjct: 140 VDNDQDHRLTLSAGRKDEPVQVEKSSIHRCACCGEPLKAKSQL-------KGRGTGLASQ 192

Query: 182 APAPSPRL-LAPTKNEESRGVDPLPHVRYTE 271
            P PSPR   A  + EE R +D L H+ YTE
Sbjct: 193 GPTPSPRAPFANLRYEEHRNMD-LSHIPYTE 222


>ref|XP_002322137.1| predicted protein [Populus trichocarpa] gi|222869133|gb|EEF06264.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   VEDDHKIHLRLPAERKKDQVLVEKSSIHRCSCCGEPLRIKTSFLKPLSIQSQASNGGVPK 181
           V+DD  IHLRLP   K + V  EKS++H+ SCCG PL++K      ++       G + +
Sbjct: 147 VDDDRDIHLRLPTGGKDNMVPAEKSNLHQGSCCGNPLKVKAYTKGKIA-------GTLSQ 199

Query: 182 APAPSPRL-LAPTKNEESRGVDPLPHVRYTE 271
           AP PSP + L   +NE+ R +D L  VRYTE
Sbjct: 200 APTPSPWVPLVSLRNEDPRKLD-LSQVRYTE 229


>ref|XP_002333015.1| predicted protein [Populus trichocarpa] gi|222834550|gb|EEE73027.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   VEDDHKIHLRLPAERKKDQVLVEKSSIHRCSCCGEPLRIKTSFLKPLSIQSQASNGGVPK 181
           V+DD  IHLRLP   K + V  EKS++H+ SCCG PL++K      ++       G + +
Sbjct: 147 VDDDRDIHLRLPTGGKDNMVPAEKSNLHQGSCCGNPLKVKAYTKGKIA-------GTLSQ 199

Query: 182 APAPSPRL-LAPTKNEESRGVDPLPHVRYTE 271
           AP PSP + L   +NE+ R +D L  VRYTE
Sbjct: 200 APTPSPWVPLVSLRNEDPRKLD-LSQVRYTE 229


>ref|XP_002318621.1| predicted protein [Populus trichocarpa] gi|222859294|gb|EEE96841.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = +2

Query: 5   EDDHKIHLRLPAERKKDQVLVEKSSIHR-CSCCGEPLRIKTSFLKPLSIQSQASNGGVPK 181
           +DD  IHLRLPA      V  +KSS H+ CSCCGEPL++K       S       G + +
Sbjct: 141 DDDRDIHLRLPALGNDIVVPADKSSPHQYCSCCGEPLKVK-------SYSKGKIAGMLSQ 193

Query: 182 APAPSPRL-LAPTKNEESRGVDPLPHVRYTE 271
           APAPSPR      +NE  R +D L HVRYTE
Sbjct: 194 APAPSPRAPFVTLRNEGPRKLD-LSHVRYTE 223


>emb|CBI15308.3| unnamed protein product [Vitis vinifera]
          Length = 600

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   VEDDHKIHLRLPAERKKDQVLVEKSSIHRCSCCGEPLRIKTSFLKPLSIQSQASNGGVPK 181
           V++DHK+ ++LP  +      V+KS +H+CSCCG PL+++ S  K    +S +    + +
Sbjct: 140 VDNDHKMQVKLPVGQ------VDKSGVHQCSCCGGPLKMRASMTKGHVPRSASHGNLLSQ 193

Query: 182 APAPSPRL-LAPTKNEESRGVDPLPHVRYTE 271
           AP PSPR     T+NE+ R ++ LP +R+ +
Sbjct: 194 APTPSPRAPFFATRNEDFRHLE-LPQIRHMD 223


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