BLASTX nr result

ID: Coptis24_contig00036577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036577
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254...    85   5e-15
emb|CAN71710.1| hypothetical protein VITISV_013457 [Vitis vinifera]    85   5e-15
ref|XP_002512049.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|NP_001236273.1| uncharacterized protein LOC100527708 [Glycin...    74   2e-11

>ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254361 [Vitis vinifera]
          Length = 225

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
 Frame = +2

Query: 62  GKSGTKFSNFCSSRVATQIRV--PSLXXXXXXXXXXXXXXX--GEKVYSDASKPISTLGR 229
           G++G +  +FC +R+   +RV  PS+                    V  + +K    +GR
Sbjct: 2   GRTGARLPSFCLNRIRPLVRVRSPSILSKPDANSIKTDQKTENSPSVGEENAKAGLIIGR 61

Query: 230 RIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKPFKQGDQ 361
           RIMIVVDSS+EAK ALQW LSHTVQSQD L+LLYV KP KQG++
Sbjct: 62  RIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEE 105


>emb|CAN71710.1| hypothetical protein VITISV_013457 [Vitis vinifera]
          Length = 392

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
 Frame = +2

Query: 62  GKSGTKFSNFCSSRVATQIRV--PSLXXXXXXXXXXXXXXX--GEKVYSDASKPISTLGR 229
           G++G +  +FC +R+   +RV  PS+                    V  + +K    +GR
Sbjct: 2   GRTGARLPSFCLNRIRPLVRVRSPSILSKPDANSIKTDQKTENSPSVGEENAKAGLIIGR 61

Query: 230 RIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKPFKQGDQ 361
           RIMIVVDSS+EAK ALQW LSHTVQSQD L+LLYV KP KQG++
Sbjct: 62  RIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEE 105


>ref|XP_002512049.1| conserved hypothetical protein [Ricinus communis]
           gi|223549229|gb|EEF50718.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
 Frame = +2

Query: 62  GKSGTKFSNFCSSRVATQIRVPSLXXXXXXXXXXXXXXXGEKVYS--------------- 196
           GK+GT+  NFC +R+   +RV S                 +K                  
Sbjct: 2   GKAGTRLPNFCLNRIRPHVRVRSPPIQSKLHSANSATKNDQKTTGQSLAGSITTAVGVGE 61

Query: 197 -----DASKPISTLGRRIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKPFKQGDQ 361
                D  KP+   GR+IMIVVDSS EAK AL W LSHTVQSQD+++LLYV KP KQ   
Sbjct: 62  GKSGDDGVKPLVINGRKIMIVVDSSFEAKGALLWALSHTVQSQDLVILLYVTKPSKQATS 121

Query: 362 E 364
           E
Sbjct: 122 E 122


>ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|222851225|gb|EEE88772.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 12/105 (11%)
 Frame = +2

Query: 62  GKSGTKFSNFCSSRVATQIRV--------PSL----XXXXXXXXXXXXXXXGEKVYSDAS 205
           GK  T+   FC +R+  ++RV        P+L                    EK  +   
Sbjct: 2   GKIDTRLPGFCLNRIKPRVRVRSPPIQAKPNLNSTKNDQNNENPDSTVVGDQEKPGNSEG 61

Query: 206 KPISTLGRRIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAK 340
           KP+  +GR+IMIVVDSSIEA+ ALQW LSHTVQSQD+L+LL+V K
Sbjct: 62  KPVELIGRKIMIVVDSSIEAQGALQWSLSHTVQSQDLLILLHVTK 106


>ref|NP_001236273.1| uncharacterized protein LOC100527708 [Glycine max]
           gi|255632998|gb|ACU16853.1| unknown [Glycine max]
          Length = 198

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 13/107 (12%)
 Frame = +2

Query: 62  GKSGTKFSNFCSSRVATQIRVPS-------------LXXXXXXXXXXXXXXXGEKVYSDA 202
           GK GT+   FC +R+    RV S                              E+ + D 
Sbjct: 2   GKRGTRLPGFCLNRIRPHARVRSPPAQANNKHDTTTTSATKIDQKTENSCNACEEKFDDG 61

Query: 203 SKPISTLGRRIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKP 343
           +KP S + R+IMIVVDSS+EAK A+QW L+HTVQ  D +VLL+V KP
Sbjct: 62  AKPGSVIARKIMIVVDSSLEAKSAVQWALTHTVQDHDTIVLLHVMKP 108


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