BLASTX nr result
ID: Coptis24_contig00036577
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036577 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254... 85 5e-15 emb|CAN71710.1| hypothetical protein VITISV_013457 [Vitis vinifera] 85 5e-15 ref|XP_002512049.1| conserved hypothetical protein [Ricinus comm... 82 6e-14 ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 ref|NP_001236273.1| uncharacterized protein LOC100527708 [Glycin... 74 2e-11 >ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254361 [Vitis vinifera] Length = 225 Score = 85.1 bits (209), Expect = 5e-15 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 4/104 (3%) Frame = +2 Query: 62 GKSGTKFSNFCSSRVATQIRV--PSLXXXXXXXXXXXXXXX--GEKVYSDASKPISTLGR 229 G++G + +FC +R+ +RV PS+ V + +K +GR Sbjct: 2 GRTGARLPSFCLNRIRPLVRVRSPSILSKPDANSIKTDQKTENSPSVGEENAKAGLIIGR 61 Query: 230 RIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKPFKQGDQ 361 RIMIVVDSS+EAK ALQW LSHTVQSQD L+LLYV KP KQG++ Sbjct: 62 RIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEE 105 >emb|CAN71710.1| hypothetical protein VITISV_013457 [Vitis vinifera] Length = 392 Score = 85.1 bits (209), Expect = 5e-15 Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 4/104 (3%) Frame = +2 Query: 62 GKSGTKFSNFCSSRVATQIRV--PSLXXXXXXXXXXXXXXX--GEKVYSDASKPISTLGR 229 G++G + +FC +R+ +RV PS+ V + +K +GR Sbjct: 2 GRTGARLPSFCLNRIRPLVRVRSPSILSKPDANSIKTDQKTENSPSVGEENAKAGLIIGR 61 Query: 230 RIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKPFKQGDQ 361 RIMIVVDSS+EAK ALQW LSHTVQSQD L+LLYV KP KQG++ Sbjct: 62 RIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEE 105 >ref|XP_002512049.1| conserved hypothetical protein [Ricinus communis] gi|223549229|gb|EEF50718.1| conserved hypothetical protein [Ricinus communis] Length = 243 Score = 81.6 bits (200), Expect = 6e-14 Identities = 49/121 (40%), Positives = 60/121 (49%), Gaps = 20/121 (16%) Frame = +2 Query: 62 GKSGTKFSNFCSSRVATQIRVPSLXXXXXXXXXXXXXXXGEKVYS--------------- 196 GK+GT+ NFC +R+ +RV S +K Sbjct: 2 GKAGTRLPNFCLNRIRPHVRVRSPPIQSKLHSANSATKNDQKTTGQSLAGSITTAVGVGE 61 Query: 197 -----DASKPISTLGRRIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKPFKQGDQ 361 D KP+ GR+IMIVVDSS EAK AL W LSHTVQSQD+++LLYV KP KQ Sbjct: 62 GKSGDDGVKPLVINGRKIMIVVDSSFEAKGALLWALSHTVQSQDLVILLYVTKPSKQATS 121 Query: 362 E 364 E Sbjct: 122 E 122 >ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|222851225|gb|EEE88772.1| predicted protein [Populus trichocarpa] Length = 237 Score = 74.7 bits (182), Expect = 7e-12 Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 12/105 (11%) Frame = +2 Query: 62 GKSGTKFSNFCSSRVATQIRV--------PSL----XXXXXXXXXXXXXXXGEKVYSDAS 205 GK T+ FC +R+ ++RV P+L EK + Sbjct: 2 GKIDTRLPGFCLNRIKPRVRVRSPPIQAKPNLNSTKNDQNNENPDSTVVGDQEKPGNSEG 61 Query: 206 KPISTLGRRIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAK 340 KP+ +GR+IMIVVDSSIEA+ ALQW LSHTVQSQD+L+LL+V K Sbjct: 62 KPVELIGRKIMIVVDSSIEAQGALQWSLSHTVQSQDLLILLHVTK 106 >ref|NP_001236273.1| uncharacterized protein LOC100527708 [Glycine max] gi|255632998|gb|ACU16853.1| unknown [Glycine max] Length = 198 Score = 73.6 bits (179), Expect = 2e-11 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 13/107 (12%) Frame = +2 Query: 62 GKSGTKFSNFCSSRVATQIRVPS-------------LXXXXXXXXXXXXXXXGEKVYSDA 202 GK GT+ FC +R+ RV S E+ + D Sbjct: 2 GKRGTRLPGFCLNRIRPHARVRSPPAQANNKHDTTTTSATKIDQKTENSCNACEEKFDDG 61 Query: 203 SKPISTLGRRIMIVVDSSIEAKCALQWVLSHTVQSQDVLVLLYVAKP 343 +KP S + R+IMIVVDSS+EAK A+QW L+HTVQ D +VLL+V KP Sbjct: 62 AKPGSVIARKIMIVVDSSLEAKSAVQWALTHTVQDHDTIVLLHVMKP 108