BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036573
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              121   5e-26
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   121   5e-26
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   115   5e-24
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/94 (63%), Positives = 69/94 (73%)
 Frame = -1

Query: 283  KTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXXXXXXX 104
            K  G+ LSTLPYSSVIDAYLKNGDH +  +KL+EMK+DGLEPDHRIWTCF+R        
Sbjct: 1089 KVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHT 1148

Query: 103  XXXXXXXXXLRDTGFDLPIRLLAERSESLVVEMD 2
                     LRDTGFDLPIRLL E+S+SLV E+D
Sbjct: 1149 SEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVD 1182


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/94 (63%), Positives = 69/94 (73%)
 Frame = -1

Query: 283 KTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXXXXXXX 104
           K  G+ LSTLPYSSVIDAYLKNGDH +  +KL+EMK+DGLEPDHRIWTCF+R        
Sbjct: 671 KVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHT 730

Query: 103 XXXXXXXXXLRDTGFDLPIRLLAERSESLVVEMD 2
                    LRDTGFDLPIRLL E+S+SLV E+D
Sbjct: 731 SEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVD 764


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/94 (63%), Positives = 69/94 (73%)
 Frame = -1

Query: 283  KTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXXXXXXX 104
            K  G+ LSTLPYSSVIDAYLKNGDH +  +KL+EMK+DGLEPDHRIWTCF+R        
Sbjct: 1121 KVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHT 1180

Query: 103  XXXXXXXXXLRDTGFDLPIRLLAERSESLVVEMD 2
                     LRDTGFDLPIRLL E+S+SLV E+D
Sbjct: 1181 SEAIVLLKALRDTGFDLPIRLLTEKSDSLVSEVD 1214


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/94 (59%), Positives = 70/94 (74%)
 Frame = -1

Query: 283  KTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXXXXXXX 104
            K +G+ LSTLPYSSVIDAYLKN D+ +G +KL+EMK++GLEPDHRIWTCFIR        
Sbjct: 1077 KEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHT 1136

Query: 103  XXXXXXXXXLRDTGFDLPIRLLAERSESLVVEMD 2
                     L+D+GFDLP RL+ ERS+SLV+E+D
Sbjct: 1137 HDAILLLQALQDSGFDLPSRLITERSDSLVLEVD 1170


>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Glycine max]
          Length = 1476

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/94 (62%), Positives = 64/94 (68%)
 Frame = -1

Query: 283  KTLGVDLSTLPYSSVIDAYLKNGDHKLGKEKLLEMKRDGLEPDHRIWTCFIRXXXXXXXX 104
            +T GV L TLPYSSVIDAYLK GD K G EKL EMK  G+EPDHRIWTCFIR        
Sbjct: 1116 RTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGT 1175

Query: 103  XXXXXXXXXLRDTGFDLPIRLLAERSESLVVEMD 2
                     L+D GFDLPIRLL E+SESLV E+D
Sbjct: 1176 NEAIVLLNALQDAGFDLPIRLLKEKSESLVSEVD 1209