BLASTX nr result

ID: Coptis24_contig00036561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036561
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629014.1| GMC-type oxidoreductase, putative [Medicago ...   110   1e-22
ref|XP_003547733.1| PREDICTED: long-chain-alcohol oxidase FAO4A-...   107   1e-21
ref|XP_003547818.1| PREDICTED: long-chain-alcohol oxidase FAO4A-...   105   4e-21
ref|XP_003612495.1| GMC-type oxidoreductase, putative [Medicago ...   102   2e-20
ref|XP_004167305.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-a...   101   7e-20

>ref|XP_003629014.1| GMC-type oxidoreductase, putative [Medicago truncatula]
           gi|355523036|gb|AET03490.1| GMC-type oxidoreductase,
           putative [Medicago truncatula]
          Length = 810

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
 Frame = +3

Query: 9   QSERPGGYENVEQHGPLYKAIFDMGSPKILLKDSLENFGFTTSISP---------DQTLA 161
           Q +    +++ E  GPLY+ + ++  P+ ++ DSL  FGF  S++P           +L 
Sbjct: 238 QEKEDCDHDDEEVIGPLYEGLVNLNYPRDIISDSLRRFGFPVSVTPPTNKASTISSPSLV 297

Query: 162 IHCDXXXXXXXXXXXXXXXXLSKAGYKVLVLEKGSYCARHNLSLLEGPSLDEMYERSGFL 341
           I CD                L+K+GYKVLVLEKGSY AR+NLSLLEGP+LD+MY  +G +
Sbjct: 298 IQCDAVVVGSGSGGGVVAGVLAKSGYKVLVLEKGSYFARNNLSLLEGPTLDQMYLANGLI 357

Query: 342 STDDLNALILAGST 383
           +TDD++ L+LAGST
Sbjct: 358 ATDDMSVLVLAGST 371


>ref|XP_003547733.1| PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max]
          Length = 743

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 10/137 (7%)
 Frame = +3

Query: 3   RDQSERPG-GYENVEQHGPLYKAIFDMGSPKILLKDSLENFGFTTSISPDQT-------- 155
           R Q E+   G E+V   GPLYK +  + +P+ ++ DSL   GF+ S +P +T        
Sbjct: 170 RGQEEKEDDGTEDVR--GPLYKGLIRINNPRDIITDSLRRVGFSVSATPKKTKASTLSSP 227

Query: 156 -LAIHCDXXXXXXXXXXXXXXXXLSKAGYKVLVLEKGSYCARHNLSLLEGPSLDEMYERS 332
            L I CD                L+ AGYKVLVLEKGSY AR+NLSLLEGPS+D+MY  +
Sbjct: 228 SLVIKCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYSARNNLSLLEGPSMDQMYLSN 287

Query: 333 GFLSTDDLNALILAGST 383
           G ++T+D++ LILAGST
Sbjct: 288 GLVATNDMSVLILAGST 304


>ref|XP_003547818.1| PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max]
          Length = 749

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 9/136 (6%)
 Frame = +3

Query: 3   RDQSERPGGYENVEQHGPLYKAIFDMGSPKILLKDSLENFGFTTSISPDQT--------- 155
           ++  +   G E+V   GPLYK +  +  P+ ++ DSL   GF+ S +P +T         
Sbjct: 177 KEDEDYDDGTEDVR--GPLYKGLIYINYPRDIITDSLRRVGFSVSATPKKTKASSLSSPS 234

Query: 156 LAIHCDXXXXXXXXXXXXXXXXLSKAGYKVLVLEKGSYCARHNLSLLEGPSLDEMYERSG 335
           L I CD                L+ AGYKVLVLEKGSY AR+NLSLLEGPS+D+MY  +G
Sbjct: 235 LVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYSARNNLSLLEGPSMDQMYLSNG 294

Query: 336 FLSTDDLNALILAGST 383
            ++T D++ LILAGST
Sbjct: 295 LVATKDMSVLILAGST 310


>ref|XP_003612495.1| GMC-type oxidoreductase, putative [Medicago truncatula]
           gi|355513830|gb|AES95453.1| GMC-type oxidoreductase,
           putative [Medicago truncatula]
          Length = 853

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 10/121 (8%)
 Frame = +3

Query: 51  GPLYKAIFDMGSPKILLKDSLENFGFTTSIS----------PDQTLAIHCDXXXXXXXXX 200
           GPLYK +  +  P+ ++ D+L  FGF  S+S             +L + CD         
Sbjct: 288 GPLYKGLVHLNYPRDIIVDTLRRFGFPVSVSRRKQKTAPSLSSPSLVVQCDAVVVGSGSG 347

Query: 201 XXXXXXXLSKAGYKVLVLEKGSYCARHNLSLLEGPSLDEMYERSGFLSTDDLNALILAGS 380
                  L+ AGYKVLVLEKG Y AR+NLSLLEGP++D+MY+  G ++TDD+N  IL+GS
Sbjct: 348 GGVVAGILANAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYQAGGLVATDDMNIFILSGS 407

Query: 381 T 383
           T
Sbjct: 408 T 408


>ref|XP_004167305.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-alcohol oxidase
           FAO4A-like, partial [Cucumis sativus]
          Length = 608

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
 Frame = +3

Query: 27  GYENVEQHGPLYKAIFDMGSPKIL--LKDSLENFGFTTSI------SPDQTLAIHCDXXX 182
           G E  E +GPL+K I ++   + +     +L  FGF  ++       P+ ++ I CD   
Sbjct: 41  GEEAEELYGPLFKGIVNLQHQQQIQVAVGALRKFGFPVTLLSPTTKPPNPSMIIKCDAVV 100

Query: 183 XXXXXXXXXXXXXLSKAGYKVLVLEKGSYCARHNLSLLEGPSLDEMYERSGFLSTDDLNA 362
                        L+ AGYKVLVLEKGSYCAR NLSLLEGP+++EMY+ SG ++TD++N 
Sbjct: 101 VGSGSGGGVIAGVLANAGYKVLVLEKGSYCARXNLSLLEGPAMEEMYQSSGLVATDNMNV 160

Query: 363 LILAGST 383
           LILAGST
Sbjct: 161 LILAGST 167


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