BLASTX nr result
ID: Coptis24_contig00036528
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036528 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270086.1| PREDICTED: uncharacterized protein LOC100255... 57 2e-06 ref|XP_003618966.1| hypothetical protein MTR_6g029390 [Medicago ... 56 3e-06 ref|XP_002319695.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002270086.1| PREDICTED: uncharacterized protein LOC100255594 [Vitis vinifera] gi|296084605|emb|CBI25626.3| unnamed protein product [Vitis vinifera] Length = 88 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/55 (52%), Positives = 32/55 (58%) Frame = +3 Query: 165 MCPLRFILVFLSATLAGYLAWRTVRXXXXXXXXXXXXXATAVLPKQKQEFSFKKV 329 MCPLRFILVF SA LAGY AWRTVR V K KQE +FK++ Sbjct: 1 MCPLRFILVFFSAVLAGYFAWRTVRSSQETGLSLEDSNLENVPSKDKQELNFKRM 55 >ref|XP_003618966.1| hypothetical protein MTR_6g029390 [Medicago truncatula] gi|355493981|gb|AES75184.1| hypothetical protein MTR_6g029390 [Medicago truncatula] gi|388522841|gb|AFK49482.1| unknown [Medicago truncatula] Length = 90 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/55 (50%), Positives = 32/55 (58%) Frame = +3 Query: 165 MCPLRFILVFLSATLAGYLAWRTVRXXXXXXXXXXXXXATAVLPKQKQEFSFKKV 329 MCPLRFILVF SA LAGY AWRTVR P +K++F FKK+ Sbjct: 1 MCPLRFILVFFSAVLAGYFAWRTVRSSPNIDLACDDSIEEEKSPFKKEDFDFKKM 55 >ref|XP_002319695.1| predicted protein [Populus trichocarpa] gi|222858071|gb|EEE95618.1| predicted protein [Populus trichocarpa] Length = 89 Score = 55.1 bits (131), Expect = 6e-06 Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +3 Query: 165 MCPLRFILVFLSATLAGYLAWRTVR-XXXXXXXXXXXXXATAVLPKQKQEFSFKKV 329 MCPLRFILVF SA LAGY AWRTVR A ++KQEF+FK++ Sbjct: 1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEIDDFVSDDSTAEKTSLREKQEFNFKRI 56