BLASTX nr result

ID: Coptis24_contig00036521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036521
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265136.2| PREDICTED: uncharacterized protein LOC100246...   210   1e-52
ref|XP_002299081.1| tir-nbs resistance protein [Populus trichoca...   205   3e-51
ref|XP_002864442.1| nucleoside-triphosphatase/ nucleotide bindin...   188   3e-46
ref|NP_200433.1| nucleoside-triphosphatase/ nucleotide binding p...   187   8e-46
ref|XP_003523852.1| PREDICTED: uncharacterized protein LOC100780...   177   6e-43

>ref|XP_002265136.2| PREDICTED: uncharacterized protein LOC100246258 [Vitis vinifera]
          Length = 985

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/161 (64%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2    KVMKIDPMQLGTLPTLDALTLIKGRRK-DYSTEEMEFLRKFDERLGRSSFGMWVVGSLLS 178
            KVM  D M L  L   DA+ LI+G+RK DY  EE++FL KFDE+LGRSSFG+WV+GSLLS
Sbjct: 577  KVMNFDIMHLPPLSLSDAMILIRGKRKKDYPAEELDFLMKFDEKLGRSSFGLWVIGSLLS 636

Query: 179  ELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSDRKN 358
            ELAISP VLFEAVN VP  + S   +LS +D++FC+NNPFLMK++ FC SVL+QT+ ++N
Sbjct: 637  ELAISPSVLFEAVNQVPLNEGSNCSNLSILDQQFCRNNPFLMKVLGFCFSVLQQTNGKRN 696

Query: 359  LLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWT 481
            LLASRMLL GAWFA AP S  LLA AA +IP+T NR RKWT
Sbjct: 697  LLASRMLLVGAWFATAPVSANLLATAANHIPTTGNRLRKWT 737


>ref|XP_002299081.1| tir-nbs resistance protein [Populus trichocarpa]
            gi|222846339|gb|EEE83886.1| tir-nbs resistance protein
            [Populus trichocarpa]
          Length = 996

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/161 (63%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2    KVMKIDPMQLGTLPTLDALTLIKG-RRKDYSTEEMEFLRKFDERLGRSSFGMWVVGSLLS 178
            K M  D MQL  L   DA+ L++G RR+DY TEE++FL KFDE+LGRS+FG+W+VGSLLS
Sbjct: 591  KTMNFDIMQLPPLELTDAMVLMRGKRRRDYPTEELQFLHKFDEKLGRSNFGLWLVGSLLS 650

Query: 179  ELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSDRKN 358
            ELAISP  LFEAVN VP ED S    +S  DE +CK+NPFLMK+++F   +L+QT  RKN
Sbjct: 651  ELAISPCALFEAVNQVPLEDGSTYSYMSMSDEHYCKSNPFLMKLLHFSFIILQQTDGRKN 710

Query: 359  LLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWT 481
            LLA RMLL GAWFAPAP S TLLA AAKN+P+  N FRKWT
Sbjct: 711  LLALRMLLVGAWFAPAPISATLLATAAKNMPAIGNGFRKWT 751


>ref|XP_002864442.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
            lyrata subsp. lyrata] gi|297310277|gb|EFH40701.1|
            nucleoside-triphosphatase/ nucleotide binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 972

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/160 (57%), Positives = 120/160 (75%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2    KVMKIDPMQLGTLPTLDALTLIKGRRK-DYSTEEMEFLRKFDERLGRSSFGMWVVGSLLS 178
            KVM  D +QL  LP+ DA+ L++GRRK DY  EE+E L+ FDE+LGR S+G+WVVGSLLS
Sbjct: 569  KVMTFDTVQLSVLPSPDAMVLLRGRRKKDYPVEEVEVLKLFDEKLGRLSYGLWVVGSLLS 628

Query: 179  ELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSDRKN 358
            ELAI P  LFEAVN +  E+ S +P L+ +DE++CK+NPF+ K++ F  +VL+Q    +N
Sbjct: 629  ELAIPPSALFEAVNKIQIEERSASPFLNVIDEQYCKSNPFVAKVLAFSLAVLEQAEGNRN 688

Query: 359  LLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKW 478
            LL+ +MLL GAWFAP P  V LLAAAAKN+P+  NRF KW
Sbjct: 689  LLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKW 728


>ref|NP_200433.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
            thaliana] gi|9758749|dbj|BAB09113.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|26449886|dbj|BAC42065.1| unknown protein [Arabidopsis
            thaliana] gi|28973201|gb|AAO63925.1| unknown protein
            [Arabidopsis thaliana] gi|332009353|gb|AED96736.1|
            nucleoside-triphosphatase/ nucleotide binding protein
            [Arabidopsis thaliana]
          Length = 973

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/160 (58%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2    KVMKIDPMQLGTLPTLDALTLIKGRRK-DYSTEEMEFLRKFDERLGRSSFGMWVVGSLLS 178
            KVM  D +QL  LP+ DA+ L++GRRK DY  EE+E L+ FDE+LGR S+G+WVVGSLLS
Sbjct: 570  KVMTFDTVQLSILPSSDAMVLLRGRRKKDYPVEEVEVLKLFDEKLGRLSYGLWVVGSLLS 629

Query: 179  ELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSDRKN 358
            ELAI P  LFEAVN V  E+ S +P L+  DE++CK+NPF+ K++ F  +VL+Q    +N
Sbjct: 630  ELAILPSALFEAVNKVQIEERSASPFLNLNDEQYCKSNPFVAKVLAFSLAVLEQAEGNRN 689

Query: 359  LLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKW 478
            LL+ +MLL GAWFAP P  V LLAAAAKN+P+  NRF KW
Sbjct: 690  LLSLKMLLVGAWFAPVPIPVNLLAAAAKNMPTGGNRFSKW 729


>ref|XP_003523852.1| PREDICTED: uncharacterized protein LOC100780810 [Glycine max]
          Length = 1019

 Score =  177 bits (450), Expect = 6e-43
 Identities = 89/161 (55%), Positives = 115/161 (71%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2    KVMKIDPMQLGTLPTLDALTLIKGR-RKDYSTEEMEFLRKFDERLGRSSFGMWVVGSLLS 178
            KVM  D +QL  LP  DA+ L+ GR RKDY  +E++ L KF+E+LGRSSFG+W++GSLLS
Sbjct: 616  KVMSYDTIQLPPLPLSDAMILMIGRKRKDYPADEIDILEKFNEKLGRSSFGVWIIGSLLS 675

Query: 179  ELAISPRVLFEAVNNVPHEDDSQNPSLSSMDERFCKNNPFLMKIMNFCSSVLKQTSDRKN 358
            ELAI P  LFEA+N  P  +DS +   S  +E++CK+NPFLMK + FC   L++T  + N
Sbjct: 676  ELAIGPSSLFEAINQEPLNEDSNSCYTSIAEEQWCKSNPFLMKTLLFCLETLEKTKAKGN 735

Query: 359  LLASRMLLAGAWFAPAPTSVTLLAAAAKNIPSTSNRFRKWT 481
            LLA RMLL   WF+PAP S +LLA AAK+IP   NR +KWT
Sbjct: 736  LLAIRMLLVSGWFSPAPISDSLLANAAKSIPMVENRLKKWT 776


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