BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036516
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase...    69   3e-10
ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase ...    69   4e-10
gb|ADK70390.1| rubisco activase [Musa AB Group]                        68   9e-10
ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase ...    67   1e-09
ref|XP_003616450.1| Ribulose-1 5-bisphosphate carboxylase/oxygen...    67   2e-09

>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Vitis vinifera]
           gi|297740331|emb|CBI30513.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +1

Query: 154 SAQQVNVPVPEGRTDPSATNFDPTARSDDGSCLYQ 258
           +AQQVN+PVPEG TDPSA NFDPTARSDDGSCLYQ
Sbjct: 439 AAQQVNLPVPEGCTDPSANNFDPTARSDDGSCLYQ 473


>ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
           precursor, putative [Ricinus communis]
           gi|223527225|gb|EEF29388.1| Ribulose bisphosphate
           carboxylase/oxygenase activase 1, chloroplast precursor,
           putative [Ricinus communis]
          Length = 474

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 154 SAQQVNVPVPEGRTDPSATNFDPTARSDDGSCLYQF 261
           +AQQV VPVPEG TDPSA NFDPTARSDDGSCLY+F
Sbjct: 439 AAQQVKVPVPEGCTDPSAENFDPTARSDDGSCLYEF 474


>gb|ADK70390.1| rubisco activase [Musa AB Group]
          Length = 68

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +1

Query: 154 SAQQVNVPVPEGRTDPSATNFDPTARSDDGSCLY 255
           +AQQVN+PVPEG TDP ATNFDPTARSDDGSCLY
Sbjct: 35  AAQQVNIPVPEGCTDPIATNFDPTARSDDGSCLY 68


>ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
           precursor, putative [Ricinus communis]
           gi|223536483|gb|EEF38130.1| Ribulose bisphosphate
           carboxylase/oxygenase activase 1, chloroplast precursor,
           putative [Ricinus communis]
          Length = 473

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +1

Query: 154 SAQQVNVPVPEGRTDPSATNFDPTARSDDGSCLYQF 261
           +AQQVN+PVPEG TDP+A NFDPTARSDDGSC Y+F
Sbjct: 438 AAQQVNIPVPEGCTDPTAQNFDPTARSDDGSCTYKF 473


>ref|XP_003616450.1| Ribulose-1 5-bisphosphate carboxylase/oxygenase activase [Medicago
           truncatula] gi|355517785|gb|AES99408.1| Ribulose-1
           5-bisphosphate carboxylase/oxygenase activase [Medicago
           truncatula]
          Length = 476

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +1

Query: 154 SAQQVNVPVPEGRTDPSATNFDPTARSDDGSCLYQF 261
           +AQQVN+P+PEG TDP+A NFDPTARSDDG+CLY F
Sbjct: 440 AAQQVNIPIPEGCTDPNAKNFDPTARSDDGTCLYTF 475