BLASTX nr result

ID: Coptis24_contig00036515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036515
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632589.1| PREDICTED: wound-induced protein 1-like [Vit...   133   2e-29
ref|XP_002323037.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_004149930.1| PREDICTED: wound-induced protein 1-like [Cuc...   114   8e-24
ref|XP_002323036.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003522016.1| PREDICTED: wound-induced protein 1-like [Gly...   107   1e-21

>ref|XP_003632589.1| PREDICTED: wound-induced protein 1-like [Vitis vinifera]
          Length = 159

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/88 (73%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   TGQANNVEFKFEPRSITAIDGRVIVEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLTVR 182
           TG++ + EFKFEPRSITAIDG VI EGWEGAQAYWVHVWTLK+GLITQFREYFNTWLTVR
Sbjct: 64  TGESVHTEFKFEPRSITAIDGCVIAEGWEGAQAYWVHVWTLKNGLITQFREYFNTWLTVR 123

Query: 183 DLRSDAGSSQSIWEVKEE--MLWQSEPR 260
           DLR       + WEV+ E   LWQS+PR
Sbjct: 124 DLR------PAEWEVRHESPTLWQSQPR 145


>ref|XP_002323037.1| predicted protein [Populus trichocarpa] gi|222867667|gb|EEF04798.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   TGQANNVEFKFEPRSITAIDGRVIVEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLTVR 182
           TG++++ +FKFEPRSI  +   VI EGWEGAQ YWVHVWTLKDG+ITQFREYFNTWLTV+
Sbjct: 48  TGESSHTKFKFEPRSIEVVGDCVIAEGWEGAQVYWVHVWTLKDGVITQFREYFNTWLTVK 107

Query: 183 DLRSDAGSSQSIWEVKEE--MLWQSEPR 260
           D+      S   WE++ E   LWQS PR
Sbjct: 108 DI------SPHGWEIRHENHTLWQSHPR 129


>ref|XP_004149930.1| PREDICTED: wound-induced protein 1-like [Cucumis sativus]
           gi|449528301|ref|XP_004171143.1| PREDICTED:
           wound-induced protein 1-like [Cucumis sativus]
          Length = 168

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   TGQANNVEFKFEPRSITAI-DGRVIVEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLTV 179
           TG +++ EF+FEPRSITAI D  V+ EGWEGAQ YWVHVWTLKDGLITQFREYFNTWL V
Sbjct: 71  TGDSSHGEFRFEPRSITAIGDSVVVAEGWEGAQVYWVHVWTLKDGLITQFREYFNTWLVV 130

Query: 180 RDLRSDAGSSQSIWEVKEEML--WQSEPR 260
            DLR  A       E++ + L  W+S+PR
Sbjct: 131 TDLRQPAWE-----EIRHDGLTVWRSQPR 154


>ref|XP_002323036.1| predicted protein [Populus trichocarpa] gi|222867666|gb|EEF04797.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/88 (57%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   TGQANNVEFKFEPRSITAIDGRVIVEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLTVR 182
           TG+++  +F+FEPR+I AI   VI+EGWEGAQ YWVHVWTLKDG+IT  REYFNTWLTV 
Sbjct: 57  TGESSQTKFRFEPRNIEAIGDCVIIEGWEGAQVYWVHVWTLKDGVITHLREYFNTWLTVT 116

Query: 183 DLRSDAGSSQSIWEVKEE--MLWQSEPR 260
           D+      S   W+++ E   LW+S PR
Sbjct: 117 DI------SPHGWKIRHENHTLWESHPR 138


>ref|XP_003522016.1| PREDICTED: wound-induced protein 1-like [Glycine max]
          Length = 156

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  NNVEFKFEPRSITAIDGRVIVEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLTVRDLRS 194
           +N  F+FEPRS+TAI   VI EGWEG +AYWVHVWT+++GLITQFREYFNTWL VRDLRS
Sbjct: 66  DNNGFRFEPRSVTAIGDCVIAEGWEG-KAYWVHVWTVRNGLITQFREYFNTWLVVRDLRS 124

Query: 195 DAGSSQSIWEVKEE--MLWQSEPR 260
                   WE K +   LWQS+PR
Sbjct: 125 QR------WENKLDNMTLWQSQPR 142


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