BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036504
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67380.1| OSIGBa0159F11.4 [Oryza sativa Indica Group] gi|1...   164   7e-39
emb|CAH66757.1| OSIGBa0158F05.6 [Oryza sativa Indica Group]           164   7e-39
gb|AAS75222.1| putative polyprotein [Oryza sativa Japonica Group...   164   9e-39
gb|AAP44696.1| putative GAG-POL precursor [Oryza sativa Japonica...   163   2e-38
gb|AAX96829.1| retrotransposon protein, putative, unclassified [...   162   2e-38

>emb|CAH67380.1| OSIGBa0159F11.4 [Oryza sativa Indica Group]
            gi|116634846|emb|CAH67296.1| OSIGBa0103O01.14 [Oryza
            sativa Indica Group]
          Length = 1965

 Score =  164 bits (415), Expect = 7e-39
 Identities = 74/119 (62%), Positives = 91/119 (76%)
 Frame = +2

Query: 2    REEVVRLKTAGIIRDVAFTDWLSNIVAVPKKNGKVRMCVDFTDVNLECPKDSYPMPRVDE 181
            REEV RL  AG IR+V  T+WL+N V VPK NGK+RMC+D+TD+N  CPKD YP+PR+D+
Sbjct: 780  REEVARLLEAGFIREVIHTEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQ 839

Query: 182  LVDRTAGFSVFSFMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQ 358
            +VD TAG  +  F+DA  GY+Q+ M   D+EKTAF+   GTYCYT MPFGLKNAG TFQ
Sbjct: 840  IVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQ 898


>emb|CAH66757.1| OSIGBa0158F05.6 [Oryza sativa Indica Group]
          Length = 973

 Score =  164 bits (415), Expect = 7e-39
 Identities = 74/119 (62%), Positives = 91/119 (76%)
 Frame = +2

Query: 2    REEVVRLKTAGIIRDVAFTDWLSNIVAVPKKNGKVRMCVDFTDVNLECPKDSYPMPRVDE 181
            REEV RL  AG IR+V   +WL+N V VPK NGK+RMC+D+TD+N  CPKDSYP+PR+D+
Sbjct: 669  REEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDSYPLPRIDQ 728

Query: 182  LVDRTAGFSVFSFMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQ 358
            +VD TAG  +  F+DA  GY+Q+ M   D+EKTAF+   GTYCYT MPFGLKNAG TFQ
Sbjct: 729  IVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPVGTYCYTSMPFGLKNAGPTFQ 787


>gb|AAS75222.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48843831|gb|AAT47090.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 2026

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/119 (62%), Positives = 91/119 (76%)
 Frame = +2

Query: 2    REEVVRLKTAGIIRDVAFTDWLSNIVAVPKKNGKVRMCVDFTDVNLECPKDSYPMPRVDE 181
            REEVVRL  AG IR+V   +WL+N V VPK NGK+RMC+D+TD+N  CPKD YP+PR+D+
Sbjct: 843  REEVVRLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQ 902

Query: 182  LVDRTAGFSVFSFMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQ 358
            +VD TAG  +  F+DA  GY+Q+ M   D+EKTAF+   GTYCYT MPFGLKNAG TFQ
Sbjct: 903  IVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPVGTYCYTSMPFGLKNAGPTFQ 961


>gb|AAP44696.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
            gi|108710974|gb|ABF98769.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1987

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/119 (62%), Positives = 90/119 (75%)
 Frame = +2

Query: 2    REEVVRLKTAGIIRDVAFTDWLSNIVAVPKKNGKVRMCVDFTDVNLECPKDSYPMPRVDE 181
            REEV RL  AG IR+V   +WL+N V VPK NGK+RMC+DFTD+N  CPKD YP+PR+D+
Sbjct: 845  REEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDFTDLNKACPKDPYPLPRIDQ 904

Query: 182  LVDRTAGFSVFSFMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQ 358
            +VD TAG  +  F+DA  GY+Q+ M   D+EKTAF+   GTYCYT MPFGLKNAG TFQ
Sbjct: 905  IVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQ 963


>gb|AAX96829.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77550075|gb|ABA92872.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1914

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = +2

Query: 2    REEVVRLKTAGIIRDVAFTDWLSNIVAVPKKNGKVRMCVDFTDVNLECPKDSYPMPRVDE 181
            REEV RL  AG IR+V   +WL+N V VPK NGK+RMC+D+TD+N  CPKD YP+PR+D+
Sbjct: 731  REEVARLLEAGFIREVIHPEWLANAVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQ 790

Query: 182  LVDRTAGFSVFSFMDASMGYNQVAMYGPDQEKTAFVVEGGTYCYTRMPFGLKNAGATFQ 358
            +VD TAG  +  F+DA  GY+Q+ M   D+EKTAF+   GTYCYT MPFGLKNAG TFQ
Sbjct: 791  IVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQ 849