BLASTX nr result

ID: Coptis24_contig00036497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036497
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61843.1| hypothetical protein [Citrus unshiu]                   58   7e-07

>dbj|BAK61843.1| hypothetical protein [Citrus unshiu]
          Length = 214

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/78 (41%), Positives = 42/78 (53%)
 Frame = -2

Query: 276 LSEIFTSFLSGRVGLLGPGCCNAIKEIRTSCWPAMXXXXXXXXXXLRQYCANVQSGAKAA 97
           L+EI+ SFL G++G +GP CC+AI  I  SCWP M          L+ YCA   S     
Sbjct: 63  LTEIYGSFLGGQIGQIGPACCDAINRISGSCWPKMFPLSPSFPSLLKNYCALPPS----- 117

Query: 96  LTASSAQTDSKLEDASVN 43
             AS A+  SK+   +VN
Sbjct: 118 -LASEAKAVSKVSIPTVN 134


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