BLASTX nr result
ID: Coptis24_contig00036489
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036489 (659 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002334343.1| predicted protein [Populus trichocarpa] gi|2... 66 7e-09 >ref|XP_002334343.1| predicted protein [Populus trichocarpa] gi|224124272|ref|XP_002329982.1| predicted protein [Populus trichocarpa] gi|118481367|gb|ABK92626.1| unknown [Populus trichocarpa] gi|222871401|gb|EEF08532.1| predicted protein [Populus trichocarpa] gi|222871407|gb|EEF08538.1| predicted protein [Populus trichocarpa] Length = 130 Score = 65.9 bits (159), Expect = 7e-09 Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 9/102 (8%) Frame = +2 Query: 95 YKKLILK-DEDDEMKETRPRRW--WVKKMNGLKSVKGFKLKSFSRKLQWRLNSTVI---- 253 Y+KLI D+ E RPRRW WVKKMNG VKG +L S SRKL ++ S ++ Sbjct: 15 YEKLINGGDQYHEKLMARPRRWRFWVKKMNG--GVKGLRL-SRSRKLTFKALSVILMPSP 71 Query: 254 PTRSAKFYAEMVKKINM--EAVLYPTSIVFSSYWGFPLVLSH 373 +R AK YA ++ +I M + LYP +I+FS++WG P VLSH Sbjct: 72 NSRIAKVYAHVIDRIKMMDDLTLYP-NIIFSTHWGLP-VLSH 111