BLASTX nr result

ID: Coptis24_contig00036489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036489
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334343.1| predicted protein [Populus trichocarpa] gi|2...    66   7e-09

>ref|XP_002334343.1| predicted protein [Populus trichocarpa]
           gi|224124272|ref|XP_002329982.1| predicted protein
           [Populus trichocarpa] gi|118481367|gb|ABK92626.1|
           unknown [Populus trichocarpa]
           gi|222871401|gb|EEF08532.1| predicted protein [Populus
           trichocarpa] gi|222871407|gb|EEF08538.1| predicted
           protein [Populus trichocarpa]
          Length = 130

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 9/102 (8%)
 Frame = +2

Query: 95  YKKLILK-DEDDEMKETRPRRW--WVKKMNGLKSVKGFKLKSFSRKLQWRLNSTVI---- 253
           Y+KLI   D+  E    RPRRW  WVKKMNG   VKG +L S SRKL ++  S ++    
Sbjct: 15  YEKLINGGDQYHEKLMARPRRWRFWVKKMNG--GVKGLRL-SRSRKLTFKALSVILMPSP 71

Query: 254 PTRSAKFYAEMVKKINM--EAVLYPTSIVFSSYWGFPLVLSH 373
            +R AK YA ++ +I M  +  LYP +I+FS++WG P VLSH
Sbjct: 72  NSRIAKVYAHVIDRIKMMDDLTLYP-NIIFSTHWGLP-VLSH 111


Top