BLASTX nr result

ID: Coptis24_contig00036480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036480
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
emb|CAN79491.1| hypothetical protein VITISV_033372 [Vitis vinifera]   111   5e-23
emb|CAN75698.1| hypothetical protein VITISV_035985 [Vitis vinifera]   108   4e-22
emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]   108   6e-22
emb|CAN67620.1| hypothetical protein VITISV_004593 [Vitis vinifera]   106   2e-21

>ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|222873215|gb|EEF10346.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/131 (41%), Positives = 84/131 (64%)
 Frame = +2

Query: 23  TNFRLNGNNYLSWSYAVEHFIRAKKKSKILTDDPPNSNDSTYEDWTASNSMVLTWLWNSM 202
           +++RLNG NYL WS  V+ F++ K K   L D+PP+  D  +  W   +SM+++WLWNS+
Sbjct: 20  SSYRLNGRNYLKWSQIVKTFLKGKGKINHLMDNPPSPEDPKFTLWDEEDSMIMSWLWNSI 79

Query: 203 EPKVLTNVQFLPTAKQVWSSLKEMYSQENNLSRIYDLFESLFKTKQGDQPIDEYYSTMKG 382
            P+V     FL TAK +W +++++YS+  + + IY++   L KTKQG+  + EYY+ MK 
Sbjct: 80  MPEVCGPYMFLVTAKDIWDAVRQIYSKVKDAALIYEIKMKLSKTKQGNMMVIEYYNIMKS 139

Query: 383 LWEELLLYQPF 415
            W EL  YQ F
Sbjct: 140 FWLELDYYQDF 150


>emb|CAN79491.1| hypothetical protein VITISV_033372 [Vitis vinifera]
          Length = 293

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
 Frame = +2

Query: 20  ITNFRLNGNNYLSWSYAVEHFIRAKKKSKILTDDP--PNSNDSTYEDWTASNSMVLTWLW 193
           I   RLNGNN+L WS AV  + R + K   LT D   P   D+ Y  W A NSM++ WL 
Sbjct: 33  IMTIRLNGNNFLLWSQAVCMYTRGRGKISCLTGDTKEPMKTDAAYATWDAENSMIMDWLL 92

Query: 194 NSMEPKVLTNVQFLPTAKQVWSSLKEMYSQENNLSRIYDLFESLFKTKQGDQPIDEYYST 373
           N ME  +  N     TAK++W ++ +MYS   N S++Y+L   L + +QG+  + +Y++T
Sbjct: 93  NVMEEDISANYMCYSTAKELWDNINQMYSDFGNKSQVYELEMKLREIQQGNNTVTKYFNT 152

Query: 374 MKGLWEELLLYQPF 415
           +KGLW++L L   +
Sbjct: 153 LKGLWQDLDLLNEY 166


>emb|CAN75698.1| hypothetical protein VITISV_035985 [Vitis vinifera]
          Length = 1105

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/134 (38%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
 Frame = +2

Query: 20  ITNFRLNGNNYLSWSYAVEHFIRAKKKSKILTDDP--PNSNDSTYEDWTASNSMVLTWLW 193
           IT  RLNG+N+L WS +V  +IR + K   LT +   P  +D  Y  W A NSMV++WL 
Sbjct: 39  ITTIRLNGDNFLRWSQSVRMYIRGRGKMGYLTREKKAPAVDDPNYAIWDAENSMVMSWLV 98

Query: 194 NSMEPKVLTNVQFLPTAKQVWSSLKEMYSQENNLSRIYDLFESLFKTKQGDQPIDEYYST 373
           NSME  + +N    P A+++W ++ +MYS   N S+I++L   L K +QG+  I +Y+++
Sbjct: 99  NSMEEDISSNYMCYPIAQELWENVNQMYSNLGNQSQIFELTLKLGKIQQGEDNITKYFNS 158

Query: 374 MKGLWEELLLYQPF 415
            K +W++L L+  +
Sbjct: 159 SKRIWQDLDLFNTY 172


>emb|CAN62623.1| hypothetical protein VITISV_001656 [Vitis vinifera]
          Length = 1394

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
 Frame = +2

Query: 17  PITNFRLNGNNYLSWSYAVEHFIRAKKKSKILTDDP--PNSNDSTYEDWTASNSMVLTWL 190
           PIT  +LNG NYL WS ++  FIR K+K   +T D   P +  STY+ W A N+MV++WL
Sbjct: 29  PITAHKLNGQNYLQWSQSILMFIRGKEKDDYITGDSAAPETTASTYKKWIAENNMVMSWL 88

Query: 191 WNSMEPKVLTNVQFLPTAKQVWSSLKEMYSQENNLSRIYDLFESLFKTKQGDQPIDEYYS 370
            NSM   +  N     TAK++W + KE +S + N S I  +   L   +QG+  + EY++
Sbjct: 89  VNSMTADIGENFLSFDTAKEIWDTAKETFSDKENTSEIIQIEGILHDLRQGNLTVTEYFN 148

Query: 371 TMKGLWEEL 397
           T+  LW +L
Sbjct: 149 TLTRLWRQL 157


>emb|CAN67620.1| hypothetical protein VITISV_004593 [Vitis vinifera]
          Length = 326

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = +2

Query: 20  ITNFRLNGNNYLSWSYAVEHFIRAKKKSKILTDDP--PNSNDSTYEDWTASNSMVLTWLW 193
           IT   LNG+N+L WS +V  +I+ + K   LT+D   P     TY  W A  SMV+ WL 
Sbjct: 29  ITTIHLNGDNFLHWSQSVPMYIQGQGKIGYLTEDKKAPGKEYLTYATWDAKKSMVMMWLV 88

Query: 194 NSMEPKVLTNVQFLPTAKQVWSSLKEMYSQENNLSRIYDLFESLFKTKQGDQPIDEYYST 373
           NSM+  + +N    PTAK++W ++  MYS   N S+I++L   L + +QG+  + +Y+++
Sbjct: 89  NSMDEDISSNYLCYPTAKELWDNINLMYSDLGNQSQIFELTLKLGEIRQGNDSVTKYFNS 148

Query: 374 MKGLWEELLLYQPF 415
           +K LW++L LY  +
Sbjct: 149 LKRLWQDLNLYNDY 162


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