BLASTX nr result

ID: Coptis24_contig00036476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036476
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282977.2| PREDICTED: serine/threonine-protein kinase N...   119   2e-25
ref|XP_002277339.1| PREDICTED: serine/threonine-protein kinase N...    90   2e-16
emb|CAN81991.1| hypothetical protein VITISV_040411 [Vitis vinifera]    89   5e-16
emb|CBI29886.3| unnamed protein product [Vitis vinifera]               79   4e-13
emb|CBI16407.3| unnamed protein product [Vitis vinifera]               75   8e-12

>ref|XP_002282977.2| PREDICTED: serine/threonine-protein kinase Nek6-like [Vitis
           vinifera]
          Length = 597

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3   RPTAAELLRHSHLQPYLAQCCELSPVFLPVKSANYSDDKPSCTKSCSKSRTGKENGGRKA 182
           RPTAAELLRH HLQPY+AQC  + PVFLP+KS   S+DK S T+S +KS   K++ G K+
Sbjct: 246 RPTAAELLRHPHLQPYVAQCQNIPPVFLPIKSEYNSNDKTSGTRSSNKSSIDKDSKGGKS 305

Query: 183 TLDASKEVASAGAITGQARTKTKNVIFSDTLTTSIP-DVRIETKRVDPTSCHRDPYTVDR 359
            L   KE+ +   + G      +N  ++   T+S   + R+ TKRVDPTSC+      ++
Sbjct: 306 RL--RKELENVQLVKGNTDVHKQNPAYNQMPTSSDSLEARVHTKRVDPTSCYDQMPKANK 363

Query: 360 GLKGKGKEEHANPDFIQKLESTDTETSFGGSTITHQEDEEHKSQLKRCEQVEETE 524
           GL         +P+F ++ E+++ ET+   ++ THQED E    +  C Q  + E
Sbjct: 364 GLV-------VDPNFTEQTENSNAETASVRTSSTHQEDVEPDELISECAQKVKKE 411


>ref|XP_002277339.1| PREDICTED: serine/threonine-protein kinase Nek6-like [Vitis
           vinifera]
          Length = 662

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
 Frame = +3

Query: 3   RPTAAELLRHSHLQPYLAQCCELSPVFLPVKSANYSDDKPSCTKSCSKSRTGKENGGRKA 182
           RPTAAELLRH HLQPYL +C   S +FLPVKS + S DK     S  K   GK+N  ++ 
Sbjct: 257 RPTAAELLRHPHLQPYLVRCRNTSSIFLPVKSEHISKDKTPRKPSPIKHSAGKDNRDKEG 316

Query: 183 TLDASKEVASAGAITGQARTKTKNVIFSDTLTTSI-PDVRIETKRVDPTSCHRDPYTVDR 359
            +   K   S   +   A  + +N+      T  +  +  +ETKRVDPTS   +      
Sbjct: 317 RV--LKMAGSVEPLEENANVQPRNLQNKAKPTPIVQTEENLETKRVDPTSYPEEVSNAVE 374

Query: 360 GLKG---------KGKEEHANPDFIQKLESTDTETSFGGSTIT----HQEDEEHKSQLKR 500
             KG           ++E  N   + + ES DTETS G +  +     +E +E +S  K 
Sbjct: 375 SSKGGSTSCATTITNEDEQVNGILLAQKESLDTETSTGSTPNSQPGDEKEQDESESAPKH 434

Query: 501 CEQVEETEV 527
             Q+++ ++
Sbjct: 435 FAQIQDGDI 443


>emb|CAN81991.1| hypothetical protein VITISV_040411 [Vitis vinifera]
          Length = 973

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
 Frame = +3

Query: 3    RPTAAELLRHSHLQPYLAQCCELSPVFLPVKSANYSDDKPSCTKSCSKSRTGKENGGRKA 182
            RPTAAELLRH HLQPYL +C   S +FLPVKS + S DK     S  K   GK+N  ++ 
Sbjct: 568  RPTAAELLRHPHLQPYLVRCRNTSSIFLPVKSEHISKDKTPRKPSPIKHSAGKDNRDKEG 627

Query: 183  TLDASKEVASAGAITGQARTKTKNVIFSDTLTTSIPDVR--IETKRVDPTSCHRDPYTVD 356
             +   K   S   +   A  + +N + +    T I      +ETKRVDPTS   +     
Sbjct: 628  RV--LKMAGSVEPLEENANVQPRN-LQNKAKPTPIXQTEEXLETKRVDPTSYPEEVSNAV 684

Query: 357  RGLKG---------KGKEEHANPDFIQKLESTDTETSFGGSTIT----HQEDEEHKSQLK 497
               KG           ++E  N   + + ES DTETS G +  +     +E +E +S  K
Sbjct: 685  ESSKGGSTSCATTITNEDEQVNGILLAQKESLDTETSTGSTPNSQPGDEKEQDESESAPK 744

Query: 498  RCEQVEETEV 527
               Q+++ ++
Sbjct: 745  HFAQIQDGDI 754


>emb|CBI29886.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
 Frame = +3

Query: 3   RPTAAELLRHSHLQPYLAQCCELSPVFLPVKSANYSDDKPSCTKSCSKSRTGKENGGRKA 182
           RPTAAELLRH HLQPYL +C   S +FLPVKS + S DK     S  K   GK+N  ++ 
Sbjct: 371 RPTAAELLRHPHLQPYLVRCRNTSSIFLPVKSEHISKDKTPRKPSPIKHSAGKDNRDKEG 430

Query: 183 TLDASKEVASAGAITGQARTKTKNVIFSDTLTTSI-PDVRIETKRVDPTSCHRDPYTVDR 359
            +   K   S   +   A  + +N+      T  +  +  +ETKRVDPTS    P  V  
Sbjct: 431 RV--LKMAGSVEPLEENANVQPRNLQNKAKPTPIVQTEENLETKRVDPTSY---PEEVSN 485

Query: 360 GLKGKGKEEHANPDFIQKLESTDTETSFG 446
            ++    ++          ES DTETS G
Sbjct: 486 AVESSKAQK----------ESLDTETSTG 504


>emb|CBI16407.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = +3

Query: 3   RPTAAELLRHSHLQPYLAQCCELSPVFLPVKSANYSDDKPSCTKSCSKSRTGKENGGRKA 182
           RPTAAELLRH HLQPY+AQC  + PVFLP+KS   S+DK S T+S +KS   K++   K 
Sbjct: 246 RPTAAELLRHPHLQPYVAQCQNIPPVFLPIKSEYNSNDKTSGTRSSNKSSIDKDS---KV 302

Query: 183 TLDASKEVASAGAITGQARTKT 248
             + +++  ++ A T   RT +
Sbjct: 303 DPNFTEQTENSNAETASVRTSS 324


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