BLASTX nr result

ID: Coptis24_contig00036463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036463
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL,...    71   8e-11
dbj|BAB11512.1| unnamed protein product [Arabidopsis thaliana]         71   8e-11
ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis t...    71   8e-11
ref|XP_002871122.1| short-chain dehydrogenase/reductase family p...    67   2e-09
dbj|BAK00206.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   3e-09

>ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like
           [Cucumis sativus] gi|449494121|ref|XP_004159455.1|
           PREDICTED: chlorophyll(ide) b reductase NOL,
           chloroplastic-like [Cucumis sativus]
          Length = 352

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 8/69 (11%)
 Frame = -3

Query: 193 SFTSRQKLGFQPKNSITVSSNQ--------QQIEPMVPSYNVLITGSTKGIGYAFAREFI 38
           S    +K+   P NS+ V+SN         QQ EPMVP YNVLITGSTKGIGYA AR+F+
Sbjct: 45  SIPPSRKISNIPTNSV-VNSNSVSTKPEEFQQKEPMVPPYNVLITGSTKGIGYALARQFL 103

Query: 37  KAGDNIVTC 11
           K GDN+V C
Sbjct: 104 KEGDNVVIC 112


>dbj|BAB11512.1| unnamed protein product [Arabidopsis thaliana]
          Length = 341

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -3

Query: 184 SRQKLGFQPKNSITVSSNQQQIEPMVPSYNVLITGSTKGIGYAFAREFIKAGDNIVTC 11
           +RQ L   P ++   +    + EPM P YN+LITGSTKGIGYA AREF+KAGDN+V C
Sbjct: 52  TRQNLTVTPSSAAVEARISGKREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVIC 109


>ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana]
           gi|75301367|sp|Q8LEU3.1|NOL_ARATH RecName:
           Full=Chlorophyll(ide) b reductase NOL, chloroplastic;
           AltName: Full=Protein NON-YELLOW COLORING 1-LIKE;
           Short=AtNOL; Short=Protein NYC1-LIKE; AltName:
           Full=Short-chain dehydrogenase/reductase NOL; Flags:
           Precursor gi|21553369|gb|AAM62462.1| unknown
           [Arabidopsis thaliana] gi|94442407|gb|ABF18991.1|
           At5g04900 [Arabidopsis thaliana]
           gi|134254417|dbj|BAF49742.1| short-chain
           dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana]
           gi|332003419|gb|AED90802.1| chlorophyll(ide) b reductase
           NOL [Arabidopsis thaliana]
          Length = 348

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -3

Query: 184 SRQKLGFQPKNSITVSSNQQQIEPMVPSYNVLITGSTKGIGYAFAREFIKAGDNIVTC 11
           +RQ L   P ++   +    + EPM P YN+LITGSTKGIGYA AREF+KAGDN+V C
Sbjct: 52  TRQNLTVTPSSAAVEARISGKREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVIC 109


>ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -3

Query: 184 SRQKLGFQPKNSITVSSNQQQIEPMVPSYNVLITGSTKG-IGYAFAREFIKAGDNIVTC 11
           +RQ L   P ++   +    + EPM P YNVLITGSTKG IGYA AREF+KAGDN+V C
Sbjct: 52  TRQNLSVTPPSAAMEARISGKREPMTPPYNVLITGSTKGFIGYALAREFLKAGDNVVIC 110


>dbj|BAK00206.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 346

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -3

Query: 118 EPMVPSYNVLITGSTKGIGYAFAREFIKAGDNIVTC 11
           EPM P YNVLITGSTKGIGYA AR+F+KAGDN+V C
Sbjct: 71  EPMAPPYNVLITGSTKGIGYALARKFLKAGDNVVIC 106


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