BLASTX nr result

ID: Coptis24_contig00036449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036449
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619299.1| NBS-LRR resistance protein [Medicago truncat...    59   4e-07
ref|XP_002531302.1| Disease resistance protein RPM1, putative [R...    57   1e-06
ref|XP_003615700.1| NBS-LRR resistance protein [Medicago truncat...    57   2e-06
ref|XP_003615699.1| NBS-LRR resistance protein [Medicago truncat...    57   2e-06
ref|XP_003619291.1| NBS-LRR resistance protein [Medicago truncat...    57   2e-06

>ref|XP_003619299.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355494314|gb|AES75517.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 1118

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   VEDIGGEVFNELLRRSFFQDMYEDVTLRIITFKMHDL----ACSVMANDCLSVKIGEIRD 169
           +E +G EV+NEL +RSFFQ++  D+   I TFKMHDL    A S+M  +C+S  + ++ +
Sbjct: 444 MEHVGNEVWNELYQRSFFQEVESDLVGNI-TFKMHDLVHDLAQSIMGEECVSCDVSKLTN 502

Query: 170 VPQKARHVSV 199
           +P +  H+S+
Sbjct: 503 LPIRVHHISL 512


>ref|XP_002531302.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223529093|gb|EEF31074.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 440

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
 Frame = +2

Query: 8   DIGGEVFNELLRRSFFQDMYEDVT----LRIITFKMHDLACSVMANDCLSVKIGEIRDVP 175
           D G E F+EL+ RSFFQD+ ED++     ++  F +HDLA S+M ++C  +++ ++ +VP
Sbjct: 89  DKGHETFSELVWRSFFQDVEEDLSGNTACKMHDF-VHDLAQSIMKDECKLIELNKVSEVP 147

Query: 176 QKARHVSV 199
           +KARH S+
Sbjct: 148 KKARHFSI 155


>ref|XP_003615700.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355517035|gb|AES98658.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 1175

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +2

Query: 2   VEDIGGEVFNELLRRSFFQDMYEDVTLRIITFKM----HDLACSVMANDCLSVKIGEIRD 169
           VED+G  V+NEL ++SFFQD+  D     I+FKM    HDLA SVM  +C+ ++   +  
Sbjct: 451 VEDVGSMVWNELCQKSFFQDIKMDNGSGDISFKMHDLVHDLAQSVMGQECMYLENSNMTT 510

Query: 170 VPQKARHVSVTYDSAPS 220
           + +   H+S  YD   S
Sbjct: 511 LSKSTHHISFHYDDVLS 527


>ref|XP_003615699.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355517034|gb|AES98657.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 1186

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +2

Query: 2   VEDIGGEVFNELLRRSFFQDMYEDVTLRIITFKM----HDLACSVMANDCLSVKIGEIRD 169
           VED+G  V+NEL ++SFFQD+  D     I+FKM    HDLA SVM  +C+ ++   +  
Sbjct: 451 VEDVGSMVWNELCQKSFFQDIKMDNGSGDISFKMHDLVHDLAQSVMGQECMYLENSNMTT 510

Query: 170 VPQKARHVSVTYDSAPS 220
           + +   H+S  YD   S
Sbjct: 511 LSKSTHHISFHYDDVLS 527


>ref|XP_003619291.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355494306|gb|AES75509.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 1144

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
 Frame = +2

Query: 2   VEDIGGEVFNELLRRSFFQDMYEDVTLRIITFKM----HDLACSVMANDCLSVKIGEIRD 169
           +E +G EV+NEL +RSFFQ++  D+    ITFKM    HDLA S+M  +C+S  + ++ +
Sbjct: 444 MEHVGNEVWNELYQRSFFQEVESDLAGN-ITFKMHDLVHDLAQSIMGEECVSCDVSKLTN 502

Query: 170 VPQKARHV 193
           +P +  H+
Sbjct: 503 LPIRVHHI 510


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