BLASTX nr result

ID: Coptis24_contig00036443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036443
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37482.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002263211.1| PREDICTED: probable L-type lectin-domain con...   138   4e-31
ref|XP_002300537.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
dbj|BAA82556.1| lectin-like protein kinase [Populus nigra]            135   3e-30
emb|CBI37712.3| unnamed protein product [Vitis vinifera]              132   2e-29

>emb|CBI37482.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/125 (56%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
 Frame = -3

Query: 372 NGALQITPDTLNSGFIRNKSGRIMYNKPFELWEESSNSSPGWVASXXXXXXXXXXXLANV 193
           NGALQ+TPD+  +  + ++SGR+++N+PF+LWE   N   G VAS           L N 
Sbjct: 52  NGALQVTPDSAGNFSLAHRSGRVLFNRPFKLWEGDGN---GRVASFNSSFLINIFRLNND 108

Query: 192 SR-GEGLAFVIAPDLNMPSNSEGQYLGLVNSTTDGNVSNHLIAIELDTAKQEFDPDDSHI 16
           S  GEG AF+IAPDLN+P  S+G+YLGL NSTTDGN +NHLIA+ELDT KQ+FD +D+HI
Sbjct: 109 SAPGEGFAFIIAPDLNLPPGSDGEYLGLTNSTTDGNPNNHLIAVELDTFKQDFDSNDNHI 168

Query: 15  GLNIN 1
           GL+IN
Sbjct: 169 GLDIN 173


>ref|XP_002263211.1| PREDICTED: probable L-type lectin-domain containing receptor kinase
           S.5 [Vitis vinifera]
          Length = 666

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/125 (56%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
 Frame = -3

Query: 372 NGALQITPDTLNSGFIRNKSGRIMYNKPFELWEESSNSSPGWVASXXXXXXXXXXXLANV 193
           NGALQ+TPD+  +  + ++SGR+++N+PF+LWE   N   G VAS           L N 
Sbjct: 52  NGALQVTPDSAGNFSLAHRSGRVLFNRPFKLWEGDGN---GRVASFNSSFLINIFRLNND 108

Query: 192 SR-GEGLAFVIAPDLNMPSNSEGQYLGLVNSTTDGNVSNHLIAIELDTAKQEFDPDDSHI 16
           S  GEG AF+IAPDLN+P  S+G+YLGL NSTTDGN +NHLIA+ELDT KQ+FD +D+HI
Sbjct: 109 SAPGEGFAFIIAPDLNLPPGSDGEYLGLTNSTTDGNPNNHLIAVELDTFKQDFDSNDNHI 168

Query: 15  GLNIN 1
           GL+IN
Sbjct: 169 GLDIN 173


>ref|XP_002300537.1| predicted protein [Populus trichocarpa] gi|222847795|gb|EEE85342.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/125 (57%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = -3

Query: 372 NGALQITPDTLNSGF-IRNKSGRIMYNKPFELWEESSNSSPGWVASXXXXXXXXXXXLAN 196
           N ALQITPD++N  F + N+SGR+M NK F LWE+        VAS           L N
Sbjct: 52  NSALQITPDSINGNFTLANRSGRVMLNKSFTLWEDDGVGGAR-VASFNSSFLINIFRLNN 110

Query: 195 VSRGEGLAFVIAPDLNMPSNSEGQYLGLVNSTTDGNVSNHLIAIELDTAKQEFDPDDSHI 16
              GEG AF+IAPDL +P NS GQYLGL NSTTD N SN ++AIELDT KQEFDPDD+H+
Sbjct: 111 SIPGEGFAFLIAPDLELPENSNGQYLGLTNSTTDNNPSNGIVAIELDTVKQEFDPDDNHM 170

Query: 15  GLNIN 1
           GLNI+
Sbjct: 171 GLNIH 175


>dbj|BAA82556.1| lectin-like protein kinase [Populus nigra]
          Length = 676

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/125 (56%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = -3

Query: 372 NGALQITPDTLNSGF-IRNKSGRIMYNKPFELWEESSNSSPGWVASXXXXXXXXXXXLAN 196
           N ALQITPD++N  F + N+SGR++ NK F LWE+        VAS           + N
Sbjct: 52  NNALQITPDSINGNFTLANRSGRVLLNKSFILWEDDGAGGVR-VASFNSSFVINIFRVNN 110

Query: 195 VSRGEGLAFVIAPDLNMPSNSEGQYLGLVNSTTDGNVSNHLIAIELDTAKQEFDPDDSHI 16
            + GEGLAF+IAPDL +P NS+GQYLGL NSTTD N  N ++AIELDT KQEFDPDD+H+
Sbjct: 111 STPGEGLAFLIAPDLALPENSDGQYLGLTNSTTDRNPENGIVAIELDTVKQEFDPDDNHM 170

Query: 15  GLNIN 1
           GLNI+
Sbjct: 171 GLNIH 175


>emb|CBI37712.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
 Frame = -3

Query: 369 GALQITPDTLNSGFIR-NKSGRIMYNKPFELWEESSNSSPGWVASXXXXXXXXXXXLANV 193
           GALQ+TPDT N  +I  NKSGRI + KPF+LW+ + +   G +AS             + 
Sbjct: 61  GALQLTPDTSNDDYIFINKSGRIFWPKPFKLWDSNGDEEDGNLASFVSFFVINIYRQPSW 120

Query: 192 SRGEGLAFVIAPDLNMPSNSEGQYLGLVNSTTDGNVSNHLIAIELDTAKQEFDPDDSHIG 13
           + GEG AFVIAP+L +P  S GQ+LGL N+TTDG+ +N ++A+E DT KQ+FDPDD+HIG
Sbjct: 121 NAGEGFAFVIAPNLTIPEASHGQWLGLTNATTDGDRTNQIVAVEFDTEKQDFDPDDNHIG 180

Query: 12  LNIN 1
           LNIN
Sbjct: 181 LNIN 184


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