BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036432
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24229.3| unnamed protein product [Vitis vinifera]              196   1e-48
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   196   1e-48
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   196   1e-48
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45

>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/132 (68%), Positives = 110/132 (83%)
 Frame = +1

Query: 1   EQSKAKPDGVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKPTLEHYSCLVDLLGRAGR 180
           +QS AKPD VTFLA++SACSH GLVD+GC+YFN M  +YG KP +EHYSCL+DLLGR GR
Sbjct: 355 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 414

Query: 181 LNEAYGILQSNPAIKEVVGSLSTLLSACNMHKNVYLGEEIARLLMKKDPDDPTTYIVLSN 360
           L EAY ILQ  P I+E VG LSTL SAC++HK + LGE+I RLL++KDPDDP+TYI+LSN
Sbjct: 415 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 474

Query: 361 LYASVGKWGDVR 396
           +YASV KW +VR
Sbjct: 475 MYASVKKWDEVR 486


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/132 (68%), Positives = 110/132 (83%)
 Frame = +1

Query: 1   EQSKAKPDGVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKPTLEHYSCLVDLLGRAGR 180
           +QS AKPD VTFLA++SACSH GLVD+GC+YFN M  +YG KP +EHYSCL+DLLGR GR
Sbjct: 502 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 561

Query: 181 LNEAYGILQSNPAIKEVVGSLSTLLSACNMHKNVYLGEEIARLLMKKDPDDPTTYIVLSN 360
           L EAY ILQ  P I+E VG LSTL SAC++HK + LGE+I RLL++KDPDDP+TYI+LSN
Sbjct: 562 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 621

Query: 361 LYASVGKWGDVR 396
           +YASV KW +VR
Sbjct: 622 MYASVKKWDEVR 633


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/132 (68%), Positives = 110/132 (83%)
 Frame = +1

Query: 1    EQSKAKPDGVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKPTLEHYSCLVDLLGRAGR 180
            +QS AKPD VTFLA++SACSH GLVD+GC+YFN M  +YG KP +EHYSCL+DLLGR GR
Sbjct: 694  QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 753

Query: 181  LNEAYGILQSNPAIKEVVGSLSTLLSACNMHKNVYLGEEIARLLMKKDPDDPTTYIVLSN 360
            L EAY ILQ  P I+E VG LSTL SAC++HK + LGE+I RLL++KDPDDP+TYI+LSN
Sbjct: 754  LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 813

Query: 361  LYASVGKWGDVR 396
            +YASV KW +VR
Sbjct: 814  MYASVKKWDEVR 825


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  187 bits (476), Expect = 6e-46
 Identities = 88/131 (67%), Positives = 105/131 (80%)
 Frame = +1

Query: 4   QSKAKPDGVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKPTLEHYSCLVDLLGRAGRL 183
           QS  KPD VTFLA++SAC H GLVD+GC+YFN M N YGI P +EHYSCL+DLLGRAGRL
Sbjct: 503 QSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRL 562

Query: 184 NEAYGILQSNPAIKEVVGSLSTLLSACNMHKNVYLGEEIARLLMKKDPDDPTTYIVLSNL 363
           +EAY ILQ NP I++ V  LSTL SAC +H+N+ LG EIAR L+ KDPDD +TYI+LSN+
Sbjct: 563 HEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNM 622

Query: 364 YASVGKWGDVR 396
           YAS  KW +VR
Sbjct: 623 YASAHKWDEVR 633


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/131 (66%), Positives = 104/131 (79%)
 Frame = +1

Query: 4   QSKAKPDGVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKPTLEHYSCLVDLLGRAGRL 183
           QS  KPD V FLA++SAC H GLVD+GC+YFN M N YGI P +EHYSCL+DLLGRAGRL
Sbjct: 503 QSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRL 562

Query: 184 NEAYGILQSNPAIKEVVGSLSTLLSACNMHKNVYLGEEIARLLMKKDPDDPTTYIVLSNL 363
           +EAY ILQ NP I++ V  LSTL SAC +H+N+ LG EIAR L+ KDPDD +TYI+LSN+
Sbjct: 563 HEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNM 622

Query: 364 YASVGKWGDVR 396
           YAS  KW +VR
Sbjct: 623 YASAHKWDEVR 633