BLASTX nr result

ID: Coptis24_contig00036431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036431
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...   132   4e-29
emb|CAN73405.1| hypothetical protein VITISV_010053 [Vitis vinifera]   127   9e-28
emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera]   126   2e-27
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   124   6e-27
emb|CAN72222.1| hypothetical protein VITISV_028929 [Vitis vinifera]   123   2e-26

>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/91 (65%), Positives = 74/91 (81%)
 Frame = -2

Query: 304  LSFTRPAITYVVGVLSQFMHKPRIPHLQAAICVLRYLKGCPGRGLLFRDNGHSRVEAWTD 125
            LS TRP I Y VGV+SQFMH P+  HL+A   ++RYLKG PGRGLLF++NGH  +EA+TD
Sbjct: 1375 LSHTRPDIAYAVGVVSQFMHSPQKHHLEAVFRIMRYLKGTPGRGLLFKNNGHLNIEAYTD 1434

Query: 124  ADYAGCRSDRRSTSGYCTTIGGNLVTWRSKR 32
            AD+AG + DRRSTSGY T +GGN+VTWRSK+
Sbjct: 1435 ADWAGSQIDRRSTSGYFTLVGGNVVTWRSKK 1465


>emb|CAN73405.1| hypothetical protein VITISV_010053 [Vitis vinifera]
          Length = 768

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/91 (67%), Positives = 71/91 (78%)
 Frame = -2

Query: 304 LSFTRPAITYVVGVLSQFMHKPRIPHLQAAICVLRYLKGCPGRGLLFRDNGHSRVEAWTD 125
           L+ TRP I Y V V+SQFMH PR PHLQAA  VL YLKG PG+G+LF+ N    +EA+TD
Sbjct: 556 LAHTRPDIAYSVSVISQFMHDPREPHLQAAYRVLHYLKGNPGKGILFKKNNTLALEAYTD 615

Query: 124 ADYAGCRSDRRSTSGYCTTIGGNLVTWRSKR 32
           ADYAG   DRRST+GYCT +GGNLVTWRSK+
Sbjct: 616 ADYAGFLVDRRSTTGYCTFLGGNLVTWRSKK 646


>emb|CAN68477.1| hypothetical protein VITISV_029627 [Vitis vinifera]
          Length = 659

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/91 (65%), Positives = 70/91 (76%)
 Frame = -2

Query: 304 LSFTRPAITYVVGVLSQFMHKPRIPHLQAAICVLRYLKGCPGRGLLFRDNGHSRVEAWTD 125
           L+ TRP I Y V V+SQFMH PR PHLQA   VL YLKG PG+G+LF+ N    +EA+TD
Sbjct: 447 LAHTRPNIVYSVSVISQFMHDPREPHLQATYRVLHYLKGNPGKGILFKKNNTVALEAYTD 506

Query: 124 ADYAGCRSDRRSTSGYCTTIGGNLVTWRSKR 32
           ADYAG   DRRST+GYCT +GGNLVTWRSK+
Sbjct: 507 ADYAGSLVDRRSTTGYCTFLGGNLVTWRSKK 537


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = -2

Query: 304  LSFTRPAITYVVGVLSQFMHKPRIPHLQAAICVLRYLKGCPGRGLLFRDNGHSRVEAWTD 125
            LS TRP I Y V V+SQFMH PR PH+ A   +LRYLK  PG+GLLF ++GH +VE +TD
Sbjct: 1729 LSHTRPDIAYAVNVVSQFMHDPRKPHMDAVERILRYLKSAPGKGLLFSNHGHLKVEGYTD 1788

Query: 124  ADYAGCRSDRRSTSGYCTTIGGNLVTWRSKR 32
            AD+AG   DR+ST+GY T +GGNLVTWRSK+
Sbjct: 1789 ADWAGSADDRKSTAGYLTFVGGNLVTWRSKK 1819


>emb|CAN72222.1| hypothetical protein VITISV_028929 [Vitis vinifera]
          Length = 651

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/91 (64%), Positives = 69/91 (75%)
 Frame = -2

Query: 304 LSFTRPAITYVVGVLSQFMHKPRIPHLQAAICVLRYLKGCPGRGLLFRDNGHSRVEAWTD 125
           L+ TRP I Y V V+SQFMH PR PHLQA   VL YLKG P +G+LF+ N    +EA+TD
Sbjct: 492 LAHTRPNIAYSVSVISQFMHDPREPHLQATYRVLHYLKGNPRKGILFKKNNTLALEAYTD 551

Query: 124 ADYAGCRSDRRSTSGYCTTIGGNLVTWRSKR 32
           ADYAG   DRRST+GYCT +GGNLVTWRSK+
Sbjct: 552 ADYAGSLVDRRSTTGYCTFLGGNLVTWRSKK 582


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