BLASTX nr result

ID: Coptis24_contig00036429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036429
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80093.1| hypothetical protein VITISV_010721 [Vitis vinifera]    56   3e-06
emb|CAN73374.1| hypothetical protein VITISV_006323 [Vitis vinifera]    56   3e-06
emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]    55   4e-06
emb|CAN63468.1| hypothetical protein VITISV_024601 [Vitis vinifera]    55   4e-06
emb|CBI37739.3| unnamed protein product [Vitis vinifera]               55   6e-06

>emb|CAN80093.1| hypothetical protein VITISV_010721 [Vitis vinifera]
          Length = 1031

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 28   PLSFPTKLVWQGPISLKVKILFW*AVSGCILTVDVLRHR---GTMVSQVCTMCDTFDKNI 198
            PL FPTK VW   +  KVK   W      + T D+L+ R     +   +C +C  + + +
Sbjct: 855  PLVFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKYGETV 914

Query: 199  CHLSLHCSFSLEVWAELTQ 255
             HL LHCS ++ +W  L Q
Sbjct: 915  DHLFLHCSLTMGLWHRLFQ 933


>emb|CAN73374.1| hypothetical protein VITISV_006323 [Vitis vinifera]
          Length = 462

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +1

Query: 37  FPTKLVWQGPISLKVKILFW*AVSGCILTVDVLRHRGTMVSQVCTMCDTFDKNICHLSLH 216
           FP+  +W   +  K+    W A+ G  LT+D+++ RG  ++  C MC   ++NI HL LH
Sbjct: 318 FPSSYIWNVNVQXKISFFAWKAMXGKALTLDMVQKRGXXLANRCFMCLEKEENINHLLLH 377

Query: 217 CSFSLEVW 240
           CS +  +W
Sbjct: 378 CSRTRVLW 385


>emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
          Length = 1875

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/70 (32%), Positives = 37/70 (52%)
 Frame = +1

Query: 31   LSFPTKLVWQGPISLKVKILFW*AVSGCILTVDVLRHRGTMVSQVCTMCDTFDKNICHLS 210
            L FP + +W   +  K     W A  G ILT+D L+ RG  +   C +C   ++N+ H+ 
Sbjct: 1706 LEFPVRCIWVDKVPTKAAFFAWEATWGKILTLDRLQRRGWQLPNCCFLCGCEEENVHHIL 1765

Query: 211  LHCSFSLEVW 240
            LHC+ +  +W
Sbjct: 1766 LHCTVARVLW 1775


>emb|CAN63468.1| hypothetical protein VITISV_024601 [Vitis vinifera]
          Length = 147

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = +1

Query: 34  SFPTKLVWQGPISLKVKILFW*AVSGCILTVDVLRHRGTMVSQVCTMCDTFDKNICHLSL 213
           +FP + +W   +  KV    W A  G ILT+D L+ RG  +   C +C   ++N  H+ L
Sbjct: 43  AFPNRXIWMDKVPTKVSFFAWEAAWGKILTLDKLQKRGWQLPNRCNLCGCEEENANHILL 102

Query: 214 HCSFSLEVW 240
           HC+    +W
Sbjct: 103 HCTVVKTIW 111


>emb|CBI37739.3| unnamed protein product [Vitis vinifera]
          Length = 4608

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/68 (36%), Positives = 38/68 (55%)
 Frame = +1

Query: 37   FPTKLVWQGPISLKVKILFW*AVSGCILTVDVLRHRGTMVSQVCTMCDTFDKNICHLSLH 216
            FP  L+W   +  KV    W A  G +LT+D L+ RG  V+  C MC   +++I H+ +H
Sbjct: 4122 FPHGLIWNPSVPSKVSFFAWEAAWGKVLTMDQLKKRGWAVANRCFMCCEEEESIDHILIH 4181

Query: 217  CSFSLEVW 240
            CS +  +W
Sbjct: 4182 CSKARALW 4189


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