BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036414
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    54   1e-12
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    46   2e-10
ref|XP_003621967.1| Heat shock protein [Medicago truncatula] gi|...    59   3e-07
ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|2...    49   4e-07
ref|XP_003622375.1| hypothetical protein MTR_7g035180 [Medicago ...    57   2e-06

>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 54.3 bits (129), Expect(2) = 1e-12
 Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = -2

Query: 213 ALTLAVEGAASRNWTRIWLETDSQLVALAFSHG-HIPWVLKSRWVRATVALSSYK--ISH 43
           A   A+E +   N   IWLETDS+LV  AFS   H+PW L++RW          K   +H
Sbjct: 59  AAIFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTH 118

Query: 42  AWREANFSADAVTK 1
             RE N  AD++ K
Sbjct: 119 IHREGNAGADSLAK 132



 Score = 43.1 bits (100), Expect(2) = 1e-12
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -1

Query: 355 VKINCDGSSLGNPGRGGVGLIFRDHHCHLLGVLAQGLGIVTNYEA 221
           VKIN DGS+ G P  G  G +FR+   H LG  AQ +G  T ++A
Sbjct: 11  VKINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKA 55


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 46.2 bits (108), Expect(2) = 2e-10
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -1

Query: 355 VKINCDGSSLGNPGRGGVGLIFRDHHCHLLGVLAQGLGIVTNYEA 221
           +KINCDGS +G+P  G +G+IFR       G  AQ +G  T  EA
Sbjct: 253 MKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEA 297



 Score = 43.5 bits (101), Expect(2) = 2e-10
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = -2

Query: 213 ALTLAVEGAASRNWTRIWLETDSQLVALAFS-HGHIPWVLKSRWVRATVALSSYK--ISH 43
           A   A+E A   + T IW+ETDS  V  AF  +  +PW +  RW    +   S +   +H
Sbjct: 301 ACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWHNCLLFCRSIRSLCTH 360

Query: 42  AWREANFSADAVTK 1
             RE N  ADA+ K
Sbjct: 361 VNREGNLVADALAK 374


>ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
           gi|357503391|ref|XP_003621984.1| Heat shock protein
           [Medicago truncatula] gi|355496982|gb|AES78185.1| Heat
           shock protein [Medicago truncatula]
           gi|355496999|gb|AES78202.1| Heat shock protein [Medicago
           truncatula]
          Length = 553

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
 Frame = -2

Query: 204 LAVEGAASRNWTRIWLETDSQLVALAF-SHGHIPWVLKSRWVRATVALSSYK--ISHAWR 34
           LAVE A  RNW  +W+E+DS+L  LA  S   +PW LK+RW+     +S+    I+H +R
Sbjct: 350 LAVECAIDRNWNNLWIESDSKLANLAVKSPNIVPWQLKNRWLNCVHLMSNMNCMITHIYR 409

Query: 33  EANFSADAVTK 1
           E N  AD + +
Sbjct: 410 EGNHCADKLAR 420


>ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|222847134|gb|EEE84681.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score = 48.9 bits (115), Expect(2) = 4e-07
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = -1

Query: 352  KINCDGSSLGNPGRGGVGLIFRDHHCHLLGVLAQGLGIV 236
            K N DGSSLG PG  G+G + R+HH HLLG+ +  +GI+
Sbjct: 1086 KWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVGIL 1124



 Score = 29.6 bits (65), Expect(2) = 4e-07
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = -2

Query: 222  QCQALTLAVEGAASR---NWTRIWLETDSQLVALAFSHGH----IPWVLKSRWVRATVAL 64
            + +A+  AVE +AS    +   I +E+DS  V     + H    + W L S   R T   
Sbjct: 1130 ELRAVVKAVELSASNRLLHHKHITIESDSTNVISWMHNPHNRPWMHWELFSTVQRLTRFF 1189

Query: 63   SSYKISHAWREANFSADAVTK 1
             S   +H +RE+N  AD + K
Sbjct: 1190 GSITFAHVYRESNNMADCMAK 1210


>ref|XP_003622375.1| hypothetical protein MTR_7g035180 [Medicago truncatula]
           gi|355497390|gb|AES78593.1| hypothetical protein
           MTR_7g035180 [Medicago truncatula]
          Length = 149

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
 Frame = -2

Query: 198 VEGAASRNWTRIWLETDSQLVALAF-SHGHIPWVLKSRWVRATVAL--SSYKISHAWREA 28
           V  A S  ++  WLET SQLV LAF S   +PWVLK+RW+     +   S+ +SH +RE 
Sbjct: 42  VSKATSNGYSHFWLETYSQLVTLAFKSSSVVPWVLKNRWLNCMYRIRHMSFFVSHIFREG 101

Query: 27  NFSADAV 7
           N  AD++
Sbjct: 102 NACADSL 108