BLASTX nr result

ID: Coptis24_contig00036410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036410
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555169.1| PREDICTED: uncharacterized protein LOC100819...    91   8e-17
ref|XP_003524047.1| PREDICTED: uncharacterized protein LOC100820...    91   8e-17
gb|AAN09857.1| putative transposon protein [Oryza sativa Japonic...    91   1e-16
emb|CAN73872.1| hypothetical protein VITISV_018163 [Vitis vinifera]    90   2e-16
gb|AAT85787.1| transposase family protein [Oryza sativa Japonica...    89   5e-16

>ref|XP_003555169.1| PREDICTED: uncharacterized protein LOC100819840 [Glycine max]
          Length = 1182

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/104 (40%), Positives = 66/104 (63%)
 Frame = +1

Query: 19  AKEKLYPSCEGPETTLSAIVKLHNLKKQFGWSGNSVTALLSMLRRWLPKENTLPVKYPIM 198
           +K+ LYP C+   T LSA++ L N+K ++GWS  S ++LL ++   LP+ENTLP  Y   
Sbjct: 9   SKKPLYPGCKNSLTLLSAVLSLVNIKARYGWSDKSFSSLLQVVHDMLPEENTLPKSYYQA 68

Query: 199 KQMLKDLGMKAKCIHMCENNCMLYWKLDENLEECRHCKKPRYKV 330
           K++L  +GM+ + IH C N+C+LY    + + +C  C   RYK+
Sbjct: 69  KKILCPMGMEYQKIHACPNDCILYRHQFQEMSKCPRCGVSRYKL 112


>ref|XP_003524047.1| PREDICTED: uncharacterized protein LOC100820009 [Glycine max]
          Length = 944

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/104 (40%), Positives = 66/104 (63%)
 Frame = +1

Query: 19  AKEKLYPSCEGPETTLSAIVKLHNLKKQFGWSGNSVTALLSMLRRWLPKENTLPVKYPIM 198
           +K+ LYP C+   T LSA++ L N+K ++GWS  S ++LL ++   LP+ENTLP  Y   
Sbjct: 9   SKKPLYPGCKNSLTLLSAVLSLVNIKARYGWSDKSFSSLLQVVHDMLPEENTLPKSYYQA 68

Query: 199 KQMLKDLGMKAKCIHMCENNCMLYWKLDENLEECRHCKKPRYKV 330
           K++L  +GM+ + IH C N+C+LY    + + +C  C   RYK+
Sbjct: 69  KKILCPMGMEYQKIHACPNDCILYRHQFQEMSKCPRCGVSRYKL 112


>gb|AAN09857.1| putative transposon protein [Oryza sativa Japonica Group]
           gi|31430701|gb|AAP52582.1| transposon protein, putative,
           CACTA, En/Spm sub-class [Oryza sativa Japonica Group]
          Length = 768

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/109 (46%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
 Frame = +1

Query: 31  LYPSCEGPETTLSAIVKLHNLKKQFGWSGNSVTALLSMLRRWLPKENTLPVKYPIMKQML 210
           LY  C+   T LSA + L  LK   GWS  S T LL +L+  LP+ENTLP      KQ+L
Sbjct: 159 LYAGCKPKHTKLSATLDLMKLKASSGWSDKSFTELLGILKDMLPQENTLPETTYEAKQVL 218

Query: 211 KDLGMKAKCIHMCENNCMLYWKLDENLEECRHCKKPRY--KVIAGKGGK 351
             LG++ + IH C N+C+LY K   NL+ C  CK  RY  K  AGKG K
Sbjct: 219 CPLGLEVRRIHACPNDCILYHKQYANLDACLVCKASRYKRKKSAGKGKK 267


>emb|CAN73872.1| hypothetical protein VITISV_018163 [Vitis vinifera]
          Length = 1482

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/108 (43%), Positives = 63/108 (58%)
 Frame = +1

Query: 4   DYKKKAKEKLYPSCEGPETTLSAIVKLHNLKKQFGWSGNSVTALLSMLRRWLPKENTLPV 183
           DY K A++ LYP C    T LSA++KL+NLK +FGWS  S + LL ML   LP  N LP+
Sbjct: 94  DYXKDAEKPLYPGCRN-FTKLSALIKLYNLKARFGWSDKSFSELLEMLGNMLPVNNELPL 152

Query: 184 KYPIMKQMLKDLGMKAKCIHMCENNCMLYWKLDENLEECRHCKKPRYK 327
                K+ L  LGM+ + IH C N+C+LY    ++   C  C   R+K
Sbjct: 153 SMYEAKKTLNTLGMEYEKIHACPNDCILYRNELKDASSCPTCGTSRWK 200


>gb|AAT85787.1| transposase family protein [Oryza sativa Japonica Group]
           gi|108709105|gb|ABF96900.1| transposon protein,
           putative, CACTA, En/Spm sub-class, expressed [Oryza
           sativa Japonica Group]
          Length = 819

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +1

Query: 31  LYPSCEGPETTLSAIVKLHNLKKQFGWSGNSVTALLSMLRRWLPKENTLPVKYPIMKQML 210
           LY  C+   T LSA + L  LK   GWS  S T LL +L+  LP+ENTLP      KQ+L
Sbjct: 89  LYAGCKPKHTKLSATLDLMKLKASSGWSDKSFTELLGILKDMLPQENTLPETTYEAKQVL 148

Query: 211 KDLGMKAKCIHMCENNCMLYWKLDENLEECRHCKKPRYKVIAGKG-GKVSKE 363
             LG++ + IH C N+C+LY K   +L+ C  CK  RYK     G GK SK+
Sbjct: 149 CPLGLEVRRIHACPNDCILYHKQYADLDACPVCKASRYKRKKSAGEGKKSKQ 200


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