BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036408
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   233   2e-59
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   213   1e-53
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   213   1e-53
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   203   1e-50
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...   201   8e-50

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  233 bits (593), Expect = 2e-59
 Identities = 129/201 (64%), Positives = 147/201 (73%), Gaps = 30/201 (14%)
 Frame = -1

Query: 513 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 334
           MP+NLT NAI  I  G++N KPLVQV+DIKLIG  NSQ+RYR LLSD+V+TQ AMLATQL
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIG--NSQERYRFLLSDAVATQQAMLATQL 58

Query: 333 NHRVKTGVVRKGSVIQLIDYICSNVQNRQIIVILNMETIIPDCEMIGNPK---------- 184
           N RVK+G VRKGSVIQLIDYICS VQNR+IIV+LNMETIIP+CE+IGNPK          
Sbjct: 59  NDRVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNTESHSTAQ 118

Query: 183 --------------------IESGNCTMPPPRMQSVQPHYQPTPPPNYRSHGAIVKNEAP 64
                               +++G   MP  R  SVQP +Q  PPPNY+SHG I+KNEAP
Sbjct: 119 KEFPGGNRARSVGVTNNNLSVQNGGNKMPSFR-PSVQPPFQ--PPPNYKSHGTILKNEAP 175

Query: 63  ARIIPIAALNPYQGRWAIKAR 1
           ARIIPIAALNPYQGRWAIKAR
Sbjct: 176 ARIIPIAALNPYQGRWAIKAR 196


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  213 bits (543), Expect = 1e-53
 Identities = 118/198 (59%), Positives = 142/198 (71%), Gaps = 27/198 (13%)
 Frame = -1

Query: 513 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 334
           MP++LT NAI+ I  G++N KPLVQV+DIKLIG  N+Q+RY LL+SD+VS + AMLATQL
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG--NAQERYSLLISDAVSAEQAMLATQL 58

Query: 333 NHRVKTGVVRKGSVIQLIDYICSNVQNRQIIVILNMETIIPDCEMIGNPKIES------- 175
           N  VKTG V+KGSVIQLIDY+CS ++NR+IIV+L +ETII DCE+IGNPK  +       
Sbjct: 59  NDVVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQ 118

Query: 174 --------------GN----CTMPPPRMQSVQPHYQP--TPPPNYRSHGAIVKNEAPARI 55
                         GN       P   +QS Q   QP   PPPNY++HGAI+KNEAPARI
Sbjct: 119 KATPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARI 178

Query: 54  IPIAALNPYQGRWAIKAR 1
           IPIAALNPYQGRWAIKAR
Sbjct: 179 IPIAALNPYQGRWAIKAR 196


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  213 bits (543), Expect = 1e-53
 Identities = 118/198 (59%), Positives = 142/198 (71%), Gaps = 27/198 (13%)
 Frame = -1

Query: 513 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNNSQDRYRLLLSDSVSTQSAMLATQL 334
           MP++LT NAI+ I  G++N KPLVQV+DIKLIG  N+Q+RY LL+SD+VS + AMLATQL
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIG--NAQERYSLLISDAVSAEQAMLATQL 58

Query: 333 NHRVKTGVVRKGSVIQLIDYICSNVQNRQIIVILNMETIIPDCEMIGNPKIES------- 175
           N  VKTG V+KGSVIQLIDY+CS ++NR+IIV+L +ETII DCE+IGNPK  +       
Sbjct: 59  NDVVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPKSSAQSENFAQ 118

Query: 174 --------------GN----CTMPPPRMQSVQPHYQP--TPPPNYRSHGAIVKNEAPARI 55
                         GN       P   +QS Q   QP   PPPNY++HGAI+KNEAPARI
Sbjct: 119 KATPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHGAIIKNEAPARI 178

Query: 54  IPIAALNPYQGRWAIKAR 1
           IPIAALNPYQGRWAIKAR
Sbjct: 179 IPIAALNPYQGRWAIKAR 196


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  203 bits (517), Expect = 1e-50
 Identities = 115/217 (52%), Positives = 141/217 (64%), Gaps = 46/217 (21%)
 Frame = -1

Query: 513 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNN--SQDRYRLLLSDSVSTQSAMLAT 340
           MP++LT NAIT I  G++NLKPL+QV++IK+IG++   SQ+RYR L+SD VS Q AM+A 
Sbjct: 1   MPVSLTPNAITAINDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 339 QLNHRVKTGVVRKGSVIQLIDYICSNVQNRQIIVILNMETIIPDCEMIGNPKI------- 181
           QLN RVK+G V KGS++QLIDYICS+V+ R++IV+LNMETI+P  E IGNP I       
Sbjct: 61  QLNDRVKSGQVEKGSIVQLIDYICSDVKGRKLIVVLNMETIVPHSETIGNPTIFGETDTE 120

Query: 180 ------ESGNCTMP-----------------PPR--------------MQSVQPHYQPTP 112
                   GN   P                 PPR                SVQP YQ  P
Sbjct: 121 AQKPLSAVGNIPPPNRVVFNEPTAQHSVNRAPPRGVNIQNPANSTPSFRPSVQPSYQ--P 178

Query: 111 PPNYRSHGAIVKNEAPARIIPIAALNPYQGRWAIKAR 1
           P +YR+HG I+KNEAPAR+IPIAALNPYQGRWAIKAR
Sbjct: 179 PASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKAR 215


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score =  201 bits (510), Expect = 8e-50
 Identities = 112/217 (51%), Positives = 139/217 (64%), Gaps = 46/217 (21%)
 Frame = -1

Query: 513 MPINLTANAITEITKGNLNLKPLVQVIDIKLIGKNN--SQDRYRLLLSDSVSTQSAMLAT 340
           MP++LT NAIT I  G++NLKPL+QV++IK+IG++   SQ+RYR L+SD VS Q AM+A 
Sbjct: 1   MPVSLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 339 QLNHRVKTGVVRKGSVIQLIDYICSNVQNRQIIVILNMETIIPDCEMIGNP--------- 187
           QLN RVK+G   KGS++QLIDYICS+V+ R++IV+LNMETI+   E IGNP         
Sbjct: 61  QLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTE 120

Query: 186 --KIESGNCTMPPPR---------------------------------MQSVQPHYQPTP 112
             K  SG   +PPP                                    SVQP YQ  P
Sbjct: 121 AQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQ--P 178

Query: 111 PPNYRSHGAIVKNEAPARIIPIAALNPYQGRWAIKAR 1
           P +YR+HG I+KNEAPAR+IPIAALNPYQGRWAIKAR
Sbjct: 179 PASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKAR 215