BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036402
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    59   5e-07

>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
 Frame = +3

Query: 15  IFTNIKAAHEDLDRVLAKPFSIDNYNKAKDL---KDILLGWYEKK---------QKCSSD 158
           +F NI+   + L + +        +N+  DL   +D+L+  +E           QK    
Sbjct: 257 VFGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFEVVLEQEEIVWFQKSREK 316

Query: 159 WIKDGGKNTRFYHLSTIYRRRQNKIDKIKDDEGEWRE 269
           WI  G +NT+++H STI RRR+N+I+ +KDDEG+W E
Sbjct: 317 WIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVE 353