BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036400
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852...   175   3e-42
ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002521561.1| replication factor C / DNA polymerase III ga...   170   1e-40
emb|CBI17494.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817...   148   4e-34

>ref|XP_003631905.1| PREDICTED: uncharacterized protein LOC100852980 [Vitis vinifera]
          Length = 766

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/105 (75%), Positives = 96/105 (91%)
 Frame = +2

Query: 11  IAPDVSTASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSV 190
           I P+VS   F+ +YKVLVLYEVDK  EN+Q++IKWIMDCY D+C+LI+CCEDDVD+L+SV
Sbjct: 530 ITPEVSNVDFKADYKVLVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESV 589

Query: 191 KNRCEVVKVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSK 325
           KNRC+V+K++APVTHEIMEVLIQIAR+E+ DLPMSFAAKIATKSK
Sbjct: 590 KNRCKVIKLEAPVTHEIMEVLIQIARKEDFDLPMSFAAKIATKSK 634


>ref|XP_002310247.1| predicted protein [Populus trichocarpa] gi|222853150|gb|EEE90697.1|
           predicted protein [Populus trichocarpa]
          Length = 924

 Score =  171 bits (434), Expect = 4e-41
 Identities = 80/106 (75%), Positives = 93/106 (87%)
 Frame = +2

Query: 8   AIAPDVSTASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDS 187
           AI PD S  +F+ +YKVLVLYEVDK  EN+Q ++KWIMDCY D+CKLILCCEDD DIL++
Sbjct: 675 AITPDFSNVNFKPDYKVLVLYEVDKAPENIQPLMKWIMDCYTDACKLILCCEDDSDILET 734

Query: 188 VKNRCEVVKVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSK 325
           VKNRC+V+KVDAPVTHEIMEVLIQIAR+E  DLPM+FAAKIA KSK
Sbjct: 735 VKNRCKVLKVDAPVTHEIMEVLIQIARKEEFDLPMNFAAKIAAKSK 780


>ref|XP_002521561.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223539239|gb|EEF40832.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 779

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/106 (72%), Positives = 94/106 (88%)
 Frame = +2

Query: 8   AIAPDVSTASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDS 187
           A+AP+VS A+F+ +YKVLVLY+VDK  E++QH+IKWIMDCY D+CKLILCCEDD DIL+ 
Sbjct: 539 ALAPEVSNATFKPDYKVLVLYQVDKAAEDIQHLIKWIMDCYTDACKLILCCEDDADILEP 598

Query: 188 VKNRCEVVKVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSK 325
           V NRC V+KVD+PVTHEIMEVLIQIAR+E  +LPM+FAA+IA KSK
Sbjct: 599 VTNRCRVIKVDSPVTHEIMEVLIQIARKEEFELPMNFAARIAAKSK 644


>emb|CBI17494.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/90 (80%), Positives = 86/90 (95%)
 Frame = +2

Query: 56  VLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDSVKNRCEVVKVDAPVTH 235
           VLVLYEVDK  EN+Q++IKWIMDCY D+C+LI+CCEDDVD+L+SVKNRC+V+K++APVTH
Sbjct: 487 VLVLYEVDKAAENIQYLIKWIMDCYTDACQLIMCCEDDVDVLESVKNRCKVIKLEAPVTH 546

Query: 236 EIMEVLIQIARQENIDLPMSFAAKIATKSK 325
           EIMEVLIQIAR+E+ DLPMSFAAKIATKSK
Sbjct: 547 EIMEVLIQIARKEDFDLPMSFAAKIATKSK 576


>ref|XP_003516562.1| PREDICTED: uncharacterized protein LOC100817775 [Glycine max]
          Length = 718

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/106 (63%), Positives = 90/106 (84%)
 Frame = +2

Query: 8   AIAPDVSTASFRTEYKVLVLYEVDKVEENVQHMIKWIMDCYMDSCKLILCCEDDVDILDS 187
           A+AP+VS  +F++++KV+VLY+V K  +N++H+IKWI+D Y D CKL+LCCEDD DI++ 
Sbjct: 481 AVAPEVSNINFKSDFKVIVLYDVHKAVDNIRHIIKWIIDRYSDICKLVLCCEDDADIIEH 540

Query: 188 VKNRCEVVKVDAPVTHEIMEVLIQIARQENIDLPMSFAAKIATKSK 325
           VKNR +V++VDAP  HEI+EVLIQIA+ E IDL M+FAAKIATKSK
Sbjct: 541 VKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSMNFAAKIATKSK 586