BLASTX nr result

ID: Coptis24_contig00036378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036378
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526642.1| Spotted leaf protein, putative [Ricinus comm...   110   9e-23
ref|XP_002262704.2| PREDICTED: U-box domain-containing protein 2...   103   1e-20
emb|CAN66286.1| hypothetical protein VITISV_011184 [Vitis vinifera]   103   1e-20
ref|XP_003522485.1| PREDICTED: E3 ubiquitin-protein ligase PUB22...    92   4e-17
ref|XP_003526867.1| PREDICTED: U-box domain-containing protein 2...    86   2e-15

>ref|XP_002526642.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223534034|gb|EEF35754.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 404

 Score =  110 bits (276), Expect = 9e-23
 Identities = 66/155 (42%), Positives = 90/155 (58%)
 Frame = -2

Query: 472 YLIQLGFFPEXXXXXXXXXXLKEAILSQEDSELAELALHCVLNLLPDSDTGSLHILGETS 293
           YL+QLGFFP            +   +SQE    +E AL CVL LLP +   SL++L E S
Sbjct: 135 YLLQLGFFPLLLELLFQEVVSE---ISQESINFSEHALSCVLRLLPFAQYESLNMLKEES 191

Query: 292 YLASFLILLEQGSTKIKMKLCYLVEAIAASSNTRQLCLVLGQTKXXXXXXXXXXXXXXXX 113
            L SF  LLE G++K+K+ LC+L+EAI++SS+TR+LC +LGQ                  
Sbjct: 192 KLQSFKSLLEHGTSKMKVGLCHLIEAISSSSDTRELCSILGQNHGLLQGLVLLVQDNCEA 251

Query: 112 XXXXNKAILALCSLKSNRECFIQEGGVNGLLSYLS 8
                KAI ALCS +SNR+  +Q G + GLL+Y+S
Sbjct: 252 PEAGIKAISALCSSESNRDNMVQGGVLKGLLTYIS 286


>ref|XP_002262704.2| PREDICTED: U-box domain-containing protein 26-like [Vitis vinifera]
          Length = 399

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/156 (39%), Positives = 87/156 (55%)
 Frame = -2

Query: 475 SYLIQLGFFPEXXXXXXXXXXLKEAILSQEDSELAELALHCVLNLLPDSDTGSLHILGET 296
           SY+IQLGF P             EA   ++  +L E AL C L LL  S+ G L++L E 
Sbjct: 131 SYMIQLGFLP---LLLELVFGQVEAEQYRDSLKLVEEALSCALKLLAFSELGCLNMLKEE 187

Query: 295 SYLASFLILLEQGSTKIKMKLCYLVEAIAASSNTRQLCLVLGQTKXXXXXXXXXXXXXXX 116
           S L S ++L + G+  IK  +C L+EAI++SS T++LC  LG T                
Sbjct: 188 SKLESLVVLFKHGTPMIKTSVCNLLEAISSSSETKELCATLGTTHQLLQGIVLLVHHDCE 247

Query: 115 XXXXXNKAILALCSLKSNRECFIQEGGVNGLLSYLS 8
                 KA+LALCS++SN+E  I+EG V+GL+SY+S
Sbjct: 248 ASEAGIKAMLALCSVESNKENLIREGAVDGLISYIS 283


>emb|CAN66286.1| hypothetical protein VITISV_011184 [Vitis vinifera]
          Length = 397

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/156 (39%), Positives = 87/156 (55%)
 Frame = -2

Query: 475 SYLIQLGFFPEXXXXXXXXXXLKEAILSQEDSELAELALHCVLNLLPDSDTGSLHILGET 296
           SY+IQLGF P             EA   ++  +L E AL C L LL  S+ G L++L E 
Sbjct: 126 SYMIQLGFLP---LLLELVFGQVEAEQYRDSLKLVEEALSCALKLLAFSELGCLNMLKEE 182

Query: 295 SYLASFLILLEQGSTKIKMKLCYLVEAIAASSNTRQLCLVLGQTKXXXXXXXXXXXXXXX 116
           S L S ++L + G+  IK  +C L+EAI++SS T++LC  LG T                
Sbjct: 183 SKLESLVVLFKHGTPMIKTSVCNLLEAISSSSETKELCATLGTTHQLLQGIVLLVHHDCE 242

Query: 115 XXXXXNKAILALCSLKSNRECFIQEGGVNGLLSYLS 8
                 KA+LALCS++SN+E  I+EG V+GL+SY+S
Sbjct: 243 ASEAGIKAMLALCSVESNKENLIREGAVDGLISYIS 278


>ref|XP_003522485.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Glycine max]
          Length = 393

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/156 (33%), Positives = 84/156 (53%)
 Frame = -2

Query: 475 SYLIQLGFFPEXXXXXXXXXXLKEAILSQEDSELAELALHCVLNLLPDSDTGSLHILGET 296
           SY  QL F P            K       + E  ELAL C+L LLP      L+++ + 
Sbjct: 127 SYFHQLSFLPLLLELVFGSRLSKS-----HNREFTELALSCILKLLPLVSLEPLNMIKDE 181

Query: 295 SYLASFLILLEQGSTKIKMKLCYLVEAIAASSNTRQLCLVLGQTKXXXXXXXXXXXXXXX 116
           S LA+FL+L E+G++ +K  LC+++++I AS  T ++C +LG +                
Sbjct: 182 SKLATFLLLFEKGTSSVKTSLCHIIDSI-ASPQTEEVCHMLGHSHKLVHEIVVLVRQNCE 240

Query: 115 XXXXXNKAILALCSLKSNRECFIQEGGVNGLLSYLS 8
                 KA+LALCSL+SNRE  ++EG ++G+++Y+S
Sbjct: 241 VSKVAIKAMLALCSLQSNRENLVREGAIDGVITYIS 276


>ref|XP_003526867.1| PREDICTED: U-box domain-containing protein 25-like [Glycine max]
          Length = 394

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
 Frame = -2

Query: 379 ELAELALHCVLNLLPDSDTGSLHILGETSYLASFLILLEQGSTKIKMKLCYLVEAIAASS 200
           E  ELAL C+L LLP      L+++ + S LA+FL+L E+G++ +K  LC+L+++  AS 
Sbjct: 154 EFTELALSCILKLLPLVSLEPLNMIKDESKLATFLLLFEKGTSSVKTSLCHLIDS-TASP 212

Query: 199 NTRQLCLVLGQT-KXXXXXXXXXXXXXXXXXXXXNKAILALCSLKSNRECFIQEGGVNGL 23
            T ++C +LG + K                     KA+LALCSL+SNRE  ++EG ++G 
Sbjct: 213 QTEEVCHMLGHSHKLVHEIVVLVRQNCEVSKVVAIKAMLALCSLQSNRENLVREGAIDGA 272

Query: 22  LSYLS 8
           ++Y+S
Sbjct: 273 ITYIS 277


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