BLASTX nr result

ID: Coptis24_contig00036377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036377
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74438.1| hypothetical protein VITISV_022954 [Vitis vinifera]    94   9e-18
gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]          94   1e-17
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            94   1e-17
emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]    94   1e-17
emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera]    94   1e-17

>emb|CAN74438.1| hypothetical protein VITISV_022954 [Vitis vinifera]
          Length = 462

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/118 (39%), Positives = 70/118 (59%)
 Frame = +2

Query: 14  VLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCVFQDFTTRTVI 193
           + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CVFQD  T+   
Sbjct: 313 IKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKRTF 372

Query: 194 GSGNEKNGLYYLDXXXXXXXXXXXXXXXXYQWHCRLGHPSVDRLRVLIPHLSPVSVLE 367
           G G+  +GLY LD                 + HCRLGHPS+  L+ L P L  +  L+
Sbjct: 373 GKGHVSDGLYILD-EWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQLYTLPSLD 429


>gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]
          Length = 450

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/118 (38%), Positives = 69/118 (58%)
 Frame = +2

Query: 14  VLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCVFQDFTTRTVI 193
           + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CVFQD  T+   
Sbjct: 290 IKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKRTF 349

Query: 194 GSGNEKNGLYYLDXXXXXXXXXXXXXXXXYQWHCRLGHPSVDRLRVLIPHLSPVSVLE 367
           G G+  +GLY LD                 + HCRLGHPS+  L+ L P    +  L+
Sbjct: 350 GKGHVSDGLYILD-EWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQFDTLPSLD 406


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/118 (38%), Positives = 69/118 (58%)
 Frame = +2

Query: 14  VLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCVFQDFTTRTVI 193
           + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CVFQD  T+   
Sbjct: 370 IKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKRTF 429

Query: 194 GSGNEKNGLYYLDXXXXXXXXXXXXXXXXYQWHCRLGHPSVDRLRVLIPHLSPVSVLE 367
           G G+  +GLY LD                 + HCRLGHPS+  L+ L P    +  L+
Sbjct: 430 GKGHVSDGLYILD-EWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQFDTLPSLD 486


>emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]
          Length = 1189

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/118 (38%), Positives = 69/118 (58%)
 Frame = +2

Query: 14  VLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCVFQDFTTRTVI 193
           + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CVFQD  T+   
Sbjct: 370 IKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKRTF 429

Query: 194 GSGNEKNGLYYLDXXXXXXXXXXXXXXXXYQWHCRLGHPSVDRLRVLIPHLSPVSVLE 367
           G G+  +GLY LD                 + HCRLGHPS+  L+ L P    +  L+
Sbjct: 430 GKGHVSDGLYILD-EWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQFDTLPSLD 486


>emb|CAN71748.1| hypothetical protein VITISV_019194 [Vitis vinifera]
          Length = 1306

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/118 (38%), Positives = 69/118 (58%)
 Frame = +2

Query: 14  VLGTGVLQPTKNLTLTFGLYVPTFPFNLLSMSQLTKSMNCSITFTPTSCVFQDFTTRTVI 193
           + G+G ++PT ++TL+  L +P   FNL+S+S+LTK++NCS++F P  CVFQD  T+   
Sbjct: 370 IKGSGTVKPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCVFQDLMTKRTF 429

Query: 194 GSGNEKNGLYYLDXXXXXXXXXXXXXXXXYQWHCRLGHPSVDRLRVLIPHLSPVSVLE 367
           G G+  +GLY LD                 + HCRLGHPS+  L+ L P    +  L+
Sbjct: 430 GKGHVSDGLYILD-EWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQFDTLPSLD 486


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