BLASTX nr result

ID: Coptis24_contig00036372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036372
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73072.1| hypothetical protein VITISV_032384 [Vitis vinifera]    84   2e-14
dbj|BAJ53124.1| JHL07K02.14 [Jatropha curcas]                          79   5e-13
ref|NP_568942.1| uncharacterized protein [Arabidopsis thaliana] ...    72   4e-11
ref|XP_002864758.1| hypothetical protein ARALYDRAFT_496355 [Arab...    72   5e-11
ref|XP_002511084.1| conserved hypothetical protein [Ricinus comm...    71   1e-10

>emb|CAN73072.1| hypothetical protein VITISV_032384 [Vitis vinifera]
          Length = 413

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/71 (59%), Positives = 54/71 (76%)
 Frame = -2

Query: 220 KATEAGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYL 41
           KAT A K+  EKQRL++ QLV +LR+IE QVNSH  +I QTLADHR  LHK FQ++ISY+
Sbjct: 26  KATIAAKEQKEKQRLEITQLVRLLRQIETQVNSHHGDIRQTLADHRRSLHKSFQKAISYI 85

Query: 40  SSIHQTGQTNE 8
           ++IH + Q  E
Sbjct: 86  AAIHHSCQNQE 96


>dbj|BAJ53124.1| JHL07K02.14 [Jatropha curcas]
          Length = 430

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = -2

Query: 220 KATEAGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYL 41
           KAT AGK+L+EKQ+  L  LV +LR++E QVN HQD I +TL +HR  LH  FQ++I Y+
Sbjct: 132 KATIAGKELMEKQQTNLLHLVQLLRQVEIQVNCHQDEIFETLDNHRASLHNLFQKAIHYI 191

Query: 40  SSIHQTGQTN 11
           S +H   + N
Sbjct: 192 SDVHSQNRDN 201


>ref|NP_568942.1| uncharacterized protein [Arabidopsis thaliana]
           gi|63003874|gb|AAY25466.1| At5g61865 [Arabidopsis
           thaliana] gi|109946451|gb|ABG48404.1| At5g61865
           [Arabidopsis thaliana] gi|332010143|gb|AED97526.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 417

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
 Frame = -2

Query: 280 SARSPFLGNTFEKEDRHRYN-KATEAGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNII 104
           +ARS  L           Y  KA  AGK+++ K + QL+QLVH+L+ IE QVNSH+++I+
Sbjct: 109 TARSGDLNIQIRSSKEENYAAKAETAGKEILHKHKGQLRQLVHMLKHIETQVNSHREDIL 168

Query: 103 QTLADHRVHLHKFFQQSISYLSSIHQTGQTNEAF 2
           Q + D R    +F Q+S+ YLSS+H   Q ++ F
Sbjct: 169 QMVDDRRTFFQEFIQKSLYYLSSVH--SQNHDTF 200


>ref|XP_002864758.1| hypothetical protein ARALYDRAFT_496355 [Arabidopsis lyrata subsp.
           lyrata] gi|297310593|gb|EFH41017.1| hypothetical protein
           ARALYDRAFT_496355 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/64 (50%), Positives = 48/64 (75%)
 Frame = -2

Query: 220 KATEAGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHRVHLHKFFQQSISYL 41
           KA  AGK+++ K + QL+QLVH+L+ IE QVNSH+++I+Q + D R    +F Q+S+ YL
Sbjct: 134 KAESAGKEILHKHKGQLRQLVHMLKHIETQVNSHREDILQMVDDRRTFFQEFIQKSLYYL 193

Query: 40  SSIH 29
           SS+H
Sbjct: 194 SSVH 197


>ref|XP_002511084.1| conserved hypothetical protein [Ricinus communis]
           gi|223550199|gb|EEF51686.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = -2

Query: 262 LGNTFEKEDRHRYNKATEAGKKLIEKQRLQLQQLVHILRRIEAQVNSHQDNIIQTLADHR 83
           LG            KAT AGK+L+ KQ   L QLV +LR+ E +VN  Q++I++TL  HR
Sbjct: 141 LGKFLHSRGESYVTKATMAGKELMVKQHTNLLQLVQLLRQTEIRVNHRQNDILETLGSHR 200

Query: 82  VHLHKFFQQSISYLSSIH 29
             LHKFFQ++  ++S++H
Sbjct: 201 ASLHKFFQKAFYHISTLH 218


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