BLASTX nr result

ID: Coptis24_contig00036347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036347
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632400.1| PREDICTED: uncharacterized protein LOC100854...   121   5e-26
emb|CBI36917.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002320319.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002302744.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002515325.1| ATP binding protein, putative [Ricinus commu...   119   3e-25

>ref|XP_003632400.1| PREDICTED: uncharacterized protein LOC100854991 [Vitis vinifera]
          Length = 379

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = -3

Query: 285 RIDGRIKICGFLGISETTGMYDIACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHP 106
           RI  R+ +C FLGISETTG+YDI CLTE+GFL DESDPV++YAL+EAVYRAL+ SD  H 
Sbjct: 279 RIKIRLTLCEFLGISETTGVYDIVCLTEYGFLADESDPVTSYALSEAVYRALLISDRGHI 338

Query: 105 PKTKFMEWIVVTVSWLMCVMSMFFTYLAYIFARLG 1
           PK   ++W ++ ++ LMC ++ FF +LA  F++LG
Sbjct: 339 PKRSILDWTLLALALLMCYLAAFFEFLAEFFSKLG 373


>emb|CBI36917.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = -3

Query: 285 RIDGRIKICGFLGISETTGMYDIACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHP 106
           RI  R+ +C FLGISETTG+YDI CLTE+GFL DESDPV++YAL+EAVYRAL+ SD  H 
Sbjct: 187 RIKIRLTLCEFLGISETTGVYDIVCLTEYGFLADESDPVTSYALSEAVYRALLISDRGHI 246

Query: 105 PKTKFMEWIVVTVSWLMCVMSMFFTYLAYIFARLG 1
           PK   ++W ++ ++ LMC ++ FF +LA  F++LG
Sbjct: 247 PKRSILDWTLLALALLMCYLAAFFEFLAEFFSKLG 281


>ref|XP_002320319.1| predicted protein [Populus trichocarpa] gi|222861092|gb|EEE98634.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/95 (56%), Positives = 71/95 (74%)
 Frame = -3

Query: 285 RIDGRIKICGFLGISETTGMYDIACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHP 106
           R+D R+++C  LGISET G+YDI CLTE+GFL +ESDPV+AYAL EAVYRAL+ SD  H 
Sbjct: 280 RMDMRLRLCERLGISETNGVYDIVCLTEYGFLAEESDPVTAYALAEAVYRALLISDRGHS 339

Query: 105 PKTKFMEWIVVTVSWLMCVMSMFFTYLAYIFARLG 1
           PK    +W +  +SWLMC M   F++LA + ++LG
Sbjct: 340 PKKNLQDWALFVLSWLMCFMGALFSFLADLCSKLG 374


>ref|XP_002302744.1| predicted protein [Populus trichocarpa] gi|222844470|gb|EEE82017.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/95 (58%), Positives = 70/95 (73%)
 Frame = -3

Query: 285 RIDGRIKICGFLGISETTGMYDIACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHP 106
           RID RIK+C  LGISET G+YDI CLTE+GFL +ESDPV+AYA+TEAVYRAL+ +D  H 
Sbjct: 280 RIDIRIKLCERLGISETNGVYDIVCLTEYGFLAEESDPVTAYAVTEAVYRALLIADRGHF 339

Query: 105 PKTKFMEWIVVTVSWLMCVMSMFFTYLAYIFARLG 1
           PK    +W V   SWLMC+    F +LA + ++LG
Sbjct: 340 PKKNLQDWAVFLFSWLMCLTGALFAFLADLCSKLG 374


>ref|XP_002515325.1| ATP binding protein, putative [Ricinus communis]
           gi|223545805|gb|EEF47309.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 382

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/95 (57%), Positives = 69/95 (72%)
 Frame = -3

Query: 285 RIDGRIKICGFLGISETTGMYDIACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHP 106
           RI+GRIKIC  LGI ET G+YD+ CLTE+GFL +ESDPV+AYA+ EAVYRAL+ SD  H 
Sbjct: 280 RIEGRIKICERLGIQETNGVYDVVCLTEYGFLAEESDPVTAYAVAEAVYRALLISDRGHF 339

Query: 105 PKTKFMEWIVVTVSWLMCVMSMFFTYLAYIFARLG 1
           P  KF +W +  +SWLM  + + F +LA I   LG
Sbjct: 340 PSKKFQDWAIFILSWLMSFLGIVFAFLAEICTALG 374


Top