BLASTX nr result

ID: Coptis24_contig00036343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036343
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002970678.1| hypothetical protein SELMODRAFT_267440 [Sela...   122   8e-35
ref|XP_002969345.1| ATP-binding cassette transporter, subfamily ...   122   8e-35
ref|XP_004133953.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   117   6e-33
ref|XP_002967127.1| hypothetical protein SELMODRAFT_169086 [Sela...   117   7e-33
ref|XP_002269589.1| PREDICTED: ABC transporter C family member 5...   117   1e-32

>ref|XP_002970678.1| hypothetical protein SELMODRAFT_267440 [Selaginella moellendorffii]
            gi|300161389|gb|EFJ28004.1| hypothetical protein
            SELMODRAFT_267440 [Selaginella moellendorffii]
          Length = 1362

 Score =  122 bits (306), Expect(2) = 8e-35
 Identities = 61/84 (72%), Positives = 69/84 (82%)
 Frame = -2

Query: 403  GQIFIDGIDISKIGLHDLRSRLSINSQDPTMFEGTVISNLDPLEECSNEQIWEALDKSQL 224
            G+I IDGIDI +IGLHDLRSRLSI  QDPT+FEGTV +NLDPLEE S+ +IWEALDK QL
Sbjct: 1165 GRIIIDGIDICRIGLHDLRSRLSIIPQDPTLFEGTVRANLDPLEEHSDTEIWEALDKCQL 1224

Query: 223  GDEVRKEEMKLDSLVTAKGENWSM 152
            GD +R  E KLDS VT  GENWS+
Sbjct: 1225 GDLLRSREDKLDSPVTENGENWSV 1248



 Score = 49.7 bits (117), Expect(2) = 8e-35
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -3

Query: 150  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT 52
            +GQRQL CLG  LL+R++ILVLDEAT+ VDTAT
Sbjct: 1248 VGQRQLFCLGRALLRRTRILVLDEATASVDTAT 1280


>ref|XP_002969345.1| ATP-binding cassette transporter, subfamily C, member 5, SmABCC5
            [Selaginella moellendorffii] gi|300162821|gb|EFJ29433.1|
            ATP-binding cassette transporter, subfamily C, member 5,
            SmABCC5 [Selaginella moellendorffii]
          Length = 1245

 Score =  122 bits (306), Expect(2) = 8e-35
 Identities = 61/84 (72%), Positives = 69/84 (82%)
 Frame = -2

Query: 403  GQIFIDGIDISKIGLHDLRSRLSINSQDPTMFEGTVISNLDPLEECSNEQIWEALDKSQL 224
            G+I IDGIDI +IGLHDLRSRLSI  QDPT+FEGTV +NLDPLEE S+ +IWEALDK QL
Sbjct: 1048 GRIIIDGIDICRIGLHDLRSRLSIIPQDPTLFEGTVRANLDPLEEHSDTEIWEALDKCQL 1107

Query: 223  GDEVRKEEMKLDSLVTAKGENWSM 152
            GD +R  E KLDS VT  GENWS+
Sbjct: 1108 GDLLRSREDKLDSPVTENGENWSV 1131



 Score = 49.7 bits (117), Expect(2) = 8e-35
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -3

Query: 150  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT 52
            +GQRQL CLG  LL+R++ILVLDEAT+ VDTAT
Sbjct: 1131 VGQRQLFCLGRALLRRTRILVLDEATASVDTAT 1163


>ref|XP_004133953.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            9-like [Cucumis sativus]
          Length = 1512

 Score =  117 bits (293), Expect(2) = 6e-33
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -2

Query: 403  GQIFIDGIDISKIGLHDLRSRLSINSQDPTMFEGTVISNLDPLEECSNEQIWEALDKSQL 224
            G I IDG+DI KIGLHDLRSRLSI  QDP+MFEGTV  NLDPLE+ ++++IWEALDK QL
Sbjct: 1316 GSIIIDGVDICKIGLHDLRSRLSIIPQDPSMFEGTVRGNLDPLEQYTDQEIWEALDKCQL 1375

Query: 223  GDEVRKEEMKLDSLVTAKGENWSM 152
            GD VR ++ KL S V   GENWS+
Sbjct: 1376 GDLVRGKDEKLSSSVVENGENWSV 1399



 Score = 48.5 bits (114), Expect(2) = 6e-33
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -3

Query: 150  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT 52
            +GQRQL CLG  LLK+S ILVLDEAT+ VD+AT
Sbjct: 1399 VGQRQLFCLGRALLKKSSILVLDEATASVDSAT 1431


>ref|XP_002967127.1| hypothetical protein SELMODRAFT_169086 [Selaginella moellendorffii]
            gi|300165118|gb|EFJ31726.1| hypothetical protein
            SELMODRAFT_169086 [Selaginella moellendorffii]
          Length = 1288

 Score =  117 bits (293), Expect(2) = 7e-33
 Identities = 57/86 (66%), Positives = 70/86 (81%)
 Frame = -2

Query: 409  TAGQIFIDGIDISKIGLHDLRSRLSINSQDPTMFEGTVISNLDPLEECSNEQIWEALDKS 230
            + G+I ID +DI+KIGLHDLRS+LSI  QDPT+FEGT+  NLDPL + S+ +IWEALDK 
Sbjct: 1098 SGGKIVIDSVDITKIGLHDLRSKLSIIPQDPTLFEGTIRYNLDPLGQFSDPEIWEALDKC 1157

Query: 229  QLGDEVRKEEMKLDSLVTAKGENWSM 152
            QLGD VR +E KLDSLV+  GENWS+
Sbjct: 1158 QLGDFVRCKEEKLDSLVSENGENWSV 1183



 Score = 48.1 bits (113), Expect(2) = 7e-33
 Identities = 22/33 (66%), Positives = 30/33 (90%)
 Frame = -3

Query: 150  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT 52
            +GQRQL CLG V+LK++++LVLDEAT+ VD+AT
Sbjct: 1183 VGQRQLFCLGRVMLKQARVLVLDEATASVDSAT 1215


>ref|XP_002269589.1| PREDICTED: ABC transporter C family member 5-like [Vitis vinifera]
          Length = 1773

 Score =  117 bits (294), Expect(2) = 1e-32
 Identities = 55/92 (59%), Positives = 72/92 (78%)
 Frame = -2

Query: 403  GQIFIDGIDISKIGLHDLRSRLSINSQDPTMFEGTVISNLDPLEECSNEQIWEALDKSQL 224
            G+I ID IDIS IGLHD+RSRLSI  QDPT+ EGT+  NLDPLEE S+++IW+ALDKSQL
Sbjct: 1583 GKIIIDNIDISTIGLHDIRSRLSIIPQDPTLLEGTIRGNLDPLEEHSDQEIWQALDKSQL 1642

Query: 223  GDEVRKEEMKLDSLVTAKGENWSMHGSEAIGM 128
            GD +R++E KLD+ V   G+NWS+   + + +
Sbjct: 1643 GDVIRQKEQKLDTPVLENGDNWSVGQRQLVSL 1674



 Score = 47.4 bits (111), Expect(2) = 1e-32
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -3

Query: 150  MGQRQLVCLG*VLLKRSKILVLDEATSLVDTAT 52
            +GQRQLV LG  LLK+++ILVLDEAT+ VDTAT
Sbjct: 1666 VGQRQLVSLGQALLKQARILVLDEATASVDTAT 1698


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