BLASTX nr result

ID: Coptis24_contig00036342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036342
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298691.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002298691.1| predicted protein [Populus trichocarpa] gi|222845949|gb|EEE83496.1|
           predicted protein [Populus trichocarpa]
          Length = 1039

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
 Frame = +1

Query: 70  NTFILEDELCNTGPDDETLIREKKRSRRVSFA--ENTSVHVFDRDDE-SSDNNTSTTKSP 240
           N   +ED   N+  D+ET+   KKRSRRVSFA  E TSVH+F+RDDE  +  +  +TKSP
Sbjct: 4   NPATIEDPSQNSNTDEETIALRKKRSRRVSFADREITSVHIFNRDDEYETPPDPPSTKSP 63

Query: 241 I 243
           I
Sbjct: 64  I 64


Top