BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036326
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]   143   1e-32
ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]        140   8e-32

>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/98 (65%), Positives = 83/98 (84%)
 Frame = -2

Query: 322 RLKLLGYTPVTSPVLFDIEDEEKETAVSHHSEKLAIAFGLICTESFLPLRIVKNLRVCRD 143
           +LK+ G+   TS VL+D+++E KE A+SHHSEKLAIAFGLI T+   P+RI+KNLRVCR+
Sbjct: 637 QLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRN 696

Query: 142 CHTAVKLISRVFDRLIVVRDRNVFHYFRDGSCSCNDYW 29
           CH+A KLIS++F+R I+ RDRN FH+F+DGSCSCNDYW
Sbjct: 697 CHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734


>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/97 (70%), Positives = 81/97 (83%)
 Frame = -2

Query: 319 LKLLGYTPVTSPVLFDIEDEEKETAVSHHSEKLAIAFGLICTESFLPLRIVKNLRVCRDC 140
           LKL GY P  S VL DIE+EEKETA+S+HSEK+AIAF LI T + +P+R+VKNLRVC DC
Sbjct: 517 LKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADC 576

Query: 139 HTAVKLISRVFDRLIVVRDRNVFHYFRDGSCSCNDYW 29
           H A+KLIS+VFDR IVVRDR+ FH+F+DG CSC DYW
Sbjct: 577 HLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613


>emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]
          Length = 348

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/97 (70%), Positives = 81/97 (83%)
 Frame = -2

Query: 319 LKLLGYTPVTSPVLFDIEDEEKETAVSHHSEKLAIAFGLICTESFLPLRIVKNLRVCRDC 140
           LKL GY P  S VL DIE+EEKETA+S+HSEK+AIAF LI T + +P+R+VKNLRVC DC
Sbjct: 252 LKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADC 311

Query: 139 HTAVKLISRVFDRLIVVRDRNVFHYFRDGSCSCNDYW 29
           H A+KLIS+VFDR IVVRDR+ FH+F+DG CSC DYW
Sbjct: 312 HLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 348


>ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  141 bits (355), Expect = 6e-32
 Identities = 62/98 (63%), Positives = 82/98 (83%)
 Frame = -2

Query: 322 RLKLLGYTPVTSPVLFDIEDEEKETAVSHHSEKLAIAFGLICTESFLPLRIVKNLRVCRD 143
           RLK +GY+P+TS +  D+++EEKE A+  HSEK+AIAFGLI     LPL I+KNLRVC D
Sbjct: 645 RLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCED 704

Query: 142 CHTAVKLISRVFDRLIVVRDRNVFHYFRDGSCSCNDYW 29
           CH+A+KLISR+++R I+VRDR+ FH+FRDG+CSCND+W
Sbjct: 705 CHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742


>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/98 (63%), Positives = 80/98 (81%)
 Frame = -2

Query: 322 RLKLLGYTPVTSPVLFDIEDEEKETAVSHHSEKLAIAFGLICTESFLPLRIVKNLRVCRD 143
           R+K+ GY P T+ V  ++E+ EKE +VSHHSEKLAIAFGL+  +    +R+ KNLRVC D
Sbjct: 597 RIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCAD 656

Query: 142 CHTAVKLISRVFDRLIVVRDRNVFHYFRDGSCSCNDYW 29
           CH+A KLIS+V+DR IVVRDRN+FH+F+DG+CSCNDYW
Sbjct: 657 CHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694