BLASTX nr result
ID: Coptis24_contig00036317
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036317 (334 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311420.1| predicted protein [Populus trichocarpa] gi|2... 125 3e-27 ref|XP_002315994.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 ref|XP_003628709.1| hypothetical protein MTR_8g065720 [Medicago ... 116 2e-24 ref|XP_002267536.1| PREDICTED: uncharacterized protein LOC100253... 116 2e-24 ref|XP_004135422.1| PREDICTED: uncharacterized protein LOC101217... 115 5e-24 >ref|XP_002311420.1| predicted protein [Populus trichocarpa] gi|222851240|gb|EEE88787.1| predicted protein [Populus trichocarpa] Length = 415 Score = 125 bits (315), Expect = 3e-27 Identities = 63/126 (50%), Positives = 86/126 (68%), Gaps = 16/126 (12%) Frame = +1 Query: 4 WSAVSKKMVTATKSLRKTRTNDESVERSVTELSIKQDPVFN----------------RND 135 +++V+ + + A+ S+ +D+ +E+S+ + IK D +F + Sbjct: 141 YASVNSRKIQASSSMN----HDKPLEQSLADFKIKDDHIFKGIVAAGPAEPRACGCVQPP 196 Query: 136 PRVDNISPYSAIENISVQKLAPEYKIGMENLIKTKTPNLKASKLWRDKPVVLHCVRRPGC 315 P VD+++PYSAIENISVQKL PEYKIGME L+KTKTP +KAS+LWRDKP VL C+RRPGC Sbjct: 197 PVVDSVAPYSAIENISVQKLTPEYKIGMERLVKTKTPPMKASELWRDKPAVLLCIRRPGC 256 Query: 316 IMCRAE 333 IMCRAE Sbjct: 257 IMCRAE 262 >ref|XP_002315994.1| predicted protein [Populus trichocarpa] gi|222865034|gb|EEF02165.1| predicted protein [Populus trichocarpa] Length = 406 Score = 120 bits (300), Expect = 1e-25 Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 16/126 (12%) Frame = +1 Query: 4 WSAVSKKMVTATKSLRKTRTNDESVERSVTELSIKQDPVFN----------------RND 135 +S+VS K + S+ D+S+E+S+ + IK +F + Sbjct: 141 YSSVSSKKMQTISSMNY----DKSLEQSLADFKIKDGYIFKGIVAAGPAELRACGCVQPP 196 Query: 136 PRVDNISPYSAIENISVQKLAPEYKIGMENLIKTKTPNLKASKLWRDKPVVLHCVRRPGC 315 P VD+++PYS+IENISVQKL PEYKIGME+L+KTKTP +KA +LWRDKP V+ C+RRPGC Sbjct: 197 PVVDSVAPYSSIENISVQKLTPEYKIGMEHLVKTKTPPMKAVELWRDKPAVILCIRRPGC 256 Query: 316 IMCRAE 333 IMCRAE Sbjct: 257 IMCRAE 262 >ref|XP_003628709.1| hypothetical protein MTR_8g065720 [Medicago truncatula] gi|355522731|gb|AET03185.1| hypothetical protein MTR_8g065720 [Medicago truncatula] Length = 409 Score = 116 bits (290), Expect = 2e-24 Identities = 61/112 (54%), Positives = 73/112 (65%), Gaps = 16/112 (14%) Frame = +1 Query: 46 LRKTRTNDESVERSVTELSIKQDPVFNR------NDPRV----------DNISPYSAIEN 177 +R +D S E+S+TEL IK VF DPR D ++PY AIEN Sbjct: 150 MRSNTISDRSFEQSLTELKIKDGYVFKGIVASEPADPRACGCVQPPPVSDQVAPYVAIEN 209 Query: 178 ISVQKLAPEYKIGMENLIKTKTPNLKASKLWRDKPVVLHCVRRPGCIMCRAE 333 ISVQK+ PEYKIGME L+K KTP +KA++LWRDKP V C+RRPGCIMCRAE Sbjct: 210 ISVQKITPEYKIGMEPLVKMKTPPMKAAELWRDKPAVFLCLRRPGCIMCRAE 261 >ref|XP_002267536.1| PREDICTED: uncharacterized protein LOC100253093 [Vitis vinifera] gi|297738213|emb|CBI27414.3| unnamed protein product [Vitis vinifera] Length = 417 Score = 116 bits (290), Expect = 2e-24 Identities = 66/130 (50%), Positives = 87/130 (66%), Gaps = 19/130 (14%) Frame = +1 Query: 1 LWSAVSKKMVTATKSLRKTRTN---DESVERSVTELSIKQDPVFN--------------- 126 L S S+K+++ +++ TR N D S+E++V+E+ IK V Sbjct: 141 LSSVNSRKILSISRA--PTRANSIYDRSLEQAVSEIKIKDGLVIKGIVAAEPAEPRACGC 198 Query: 127 -RNDPRVDNISPYSAIENISVQKLAPEYKIGMENLIKTKTPNLKASKLWRDKPVVLHCVR 303 + P V+++ PYSAIEN+SVQKLAPEYKIGME L+KT TP +KAS+LWRDKP VL C+R Sbjct: 199 VQPPPIVEDVCPYSAIENVSVQKLAPEYKIGMERLVKT-TPPMKASELWRDKPAVLLCIR 257 Query: 304 RPGCIMCRAE 333 RPGCIMCRAE Sbjct: 258 RPGCIMCRAE 267 >ref|XP_004135422.1| PREDICTED: uncharacterized protein LOC101217484 [Cucumis sativus] gi|449493522|ref|XP_004159330.1| PREDICTED: uncharacterized protein LOC101230345 [Cucumis sativus] Length = 413 Score = 115 bits (287), Expect = 5e-24 Identities = 61/122 (50%), Positives = 79/122 (64%), Gaps = 16/122 (13%) Frame = +1 Query: 16 SKKMVTATKSLRKTRTNDESVERSVTELSIKQDPVFNR---------------NDPR-VD 147 SK+M +S+R D++VE++++E I+ F P VD Sbjct: 137 SKRM----QSMRSRNFQDKTVEQAMSEFKIEDGYEFKGIVATELAGHIACGCVQPPHIVD 192 Query: 148 NISPYSAIENISVQKLAPEYKIGMENLIKTKTPNLKASKLWRDKPVVLHCVRRPGCIMCR 327 I+PYSAIENIS+QKL PEYKIGME L+KTKTP +KAS LW+DKP ++ C+RRPGCIMCR Sbjct: 193 KIAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKASSLWQDKPAIILCIRRPGCIMCR 252 Query: 328 AE 333 AE Sbjct: 253 AE 254