BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036307
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-65
ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   251   6e-65
ref|XP_002525440.1| pentatricopeptide repeat-containing protein,...   245   2e-63
ref|XP_003619016.1| Pentatricopeptide repeat-containing protein ...   239   1e-61
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   238   3e-61

>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
           predicted protein [Populus trichocarpa]
          Length = 989

 Score =  253 bits (645), Expect = 1e-65
 Identities = 126/166 (75%), Positives = 142/166 (85%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           QI G+ PN++TYPSILRTCT +GALDLGEQIHT V+KTGF  NVYVCSVLIDMYAKHG+L
Sbjct: 407 QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKL 466

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
           + A  IL  LTE+DVVSWTA+ISGY QH +  EAL+ F EML RGIQSDNIG SSA+SAC
Sbjct: 467 DTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISAC 526

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYL 499
           A IQALNQGRQIHAQ+ V GYS DLSIGNAL++LYARCGR+ EAYL
Sbjct: 527 AGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYL 572



 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/163 (36%), Positives = 92/163 (56%)
 Frame = +2

Query: 8   AGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
           AG+ P  Y + S+L  CT +   D+GEQ+H LV K G     YVC+ L+ +Y++      
Sbjct: 207 AGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVS 266

Query: 188 ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
           A K+  K+  +D VS+ ++ISG  Q   S  ALELF +M    ++ D + ++S LSACA 
Sbjct: 267 AEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACAS 326

Query: 368 IQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAY 496
             AL +G Q+H+     G S D+ +  AL++LY  C  +  A+
Sbjct: 327 NGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369



 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/161 (31%), Positives = 93/161 (57%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           G++ +   + S +  C  + AL+ G QIH     +G+ +++ + + L+ +YA+ GR++ A
Sbjct: 511 GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
                K+  +D +SW  +ISG+ Q     +AL++F +M    +++      SA+SA A+I
Sbjct: 571 YLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANI 630

Query: 371 QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
             + QG+QIHA     G+  D+ + NALI  YA+CG +++A
Sbjct: 631 ANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDA 671



 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
 Frame = +2

Query: 14  VEPNEYTYPSILRTCT-FLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           V P E ++ S+LR C+     +   EQIH  ++  G   +  + + LI +YAK+G +  A
Sbjct: 107 VSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISA 166

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
           RK+   L  +D VSW AMISG+ Q+    EA+ LF EM   GI       SS LS C  I
Sbjct: 167 RKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKI 226

Query: 371 QALNQGRQIHAQACVFGYSLDLSIGNALINLYAR 472
           +  + G Q+HA    +G SL+  + NAL+ LY+R
Sbjct: 227 KLFDVGEQLHALVFKYGSSLETYVCNALVTLYSR 260



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/162 (29%), Positives = 88/162 (54%)
 Frame = +2

Query: 14  VEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELAR 193
           ++P+  T  S+L  C   GAL  GEQ+H+ V+K G   ++ V   L+D+Y     ++ A 
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369

Query: 194 KILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADIQ 373
           ++      E+VV W  M+  + + +   E+  +F +M I+G+  +     S L  C  + 
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429

Query: 374 ALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYL 499
           AL+ G QIH Q    G+  ++ + + LI++YA+ G++D A++
Sbjct: 430 ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHV 471



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/127 (34%), Positives = 74/127 (58%)
 Frame = +2

Query: 8   AGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
           A +E + +T+ S +     +  +  G+QIH +++K GFD ++ V + LI  YAK G +E 
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIED 670

Query: 188 ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
           AR+   ++ E++ VSW AMI+GY QH    EA+ LF +M   G   +++     LSAC+ 
Sbjct: 671 ARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSH 730

Query: 368 IQALNQG 388
           +  + +G
Sbjct: 731 VGLVTKG 737



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           G+  N  TY  +L  C   G+L   +++H  ++K GF     +C+ L+D+Y   G L+  
Sbjct: 5   GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
            K+   +    V SW  +ISG+++ +MS   L+LF  M+   +    I  +S L AC+  
Sbjct: 65  VKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGH 124

Query: 371 Q-ALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
           +  +    QIHA+    G      I N LI LYA+ G +  A
Sbjct: 125 RIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISA 166


>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  251 bits (640), Expect = 6e-65
 Identities = 124/167 (74%), Positives = 143/167 (85%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           QI G+ PN+YTYPSILRTCT LGALDLGEQIHT V+K+GF  NVYVCSVLIDMYAKHG L
Sbjct: 407 QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGEL 466

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
           + AR IL +L EEDVVSWTAMI+GY QH++  EAL+LF EM  +GI+SDNIG SSA+SAC
Sbjct: 467 DTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC 526

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYLA 502
           A IQALNQG+QIHAQ+ + GYS DLSIGNAL++LYARCGR  +AYLA
Sbjct: 527 AGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLA 573



 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/163 (34%), Positives = 95/163 (58%)
 Frame = +2

Query: 8   AGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
           + V P  Y + S+L  CT +    LGEQ+H  +VK G     +VC+ L+ +Y++ G L  
Sbjct: 207 SAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIA 266

Query: 188 ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
           A +I  K+   D +S+ ++ISG  Q   S  AL+LF +M +  ++ D + ++S LSACA 
Sbjct: 267 AEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACAS 326

Query: 368 IQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAY 496
           + A  +G+Q+H+     G S DL I  +L++LY +C  ++ A+
Sbjct: 327 VGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369



 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
 Frame = +2

Query: 14  VEPNEYTYPSILRTCTFLGA-LDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           V P+E T+ S+LR C+   A   + EQIH  ++  GF  +  VC+ LID+Y+K+G ++LA
Sbjct: 107 VTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLA 166

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
           + +  +L  +D VSW AMISG  Q+    EA+ LF +M    +       SS LSAC  I
Sbjct: 167 KLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKI 226

Query: 371 QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRV 484
           +    G Q+H     +G S +  + NAL+ LY+R G +
Sbjct: 227 ELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNL 264



 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/161 (32%), Positives = 92/161 (57%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           G+  +   + S +  C  + AL+ G+QIH     +G+ +++ + + L+ +YA+ GR + A
Sbjct: 511 GIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA 570

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
                K+  +D +SW A+ISG+ Q     EAL++F +M   G++++     SA+SA A+ 
Sbjct: 571 YLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANT 630

Query: 371 QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
             + QG+QIHA     GY  +    N LI LY++CG +++A
Sbjct: 631 ANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDA 671



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/127 (37%), Positives = 77/127 (60%)
 Frame = +2

Query: 8   AGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
           AGVE N +T+ S +        +  G+QIH +++KTG+D      +VLI +Y+K G +E 
Sbjct: 611 AGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIED 670

Query: 188 ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
           A++   ++ E++VVSW AMI+GY QH    EA+ LF EM   G+  +++     LSAC+ 
Sbjct: 671 AKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSH 730

Query: 368 IQALNQG 388
           +  +N+G
Sbjct: 731 VGLVNEG 737



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/164 (30%), Positives = 86/164 (52%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           Q+  ++P+  T  S+L  C  +GA   G+Q+H+ V+K G   ++ +   L+D+Y K   +
Sbjct: 306 QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDI 365

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
           E A +       E+VV W  M+  Y Q     E+  +F++M I G+  +     S L  C
Sbjct: 366 ETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
             + AL+ G QIH Q    G+  ++ + + LI++YA+ G +D A
Sbjct: 426 TSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTA 469



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           G+  N  TY  +   C   G+L   +++H  + K+GFD    + S LID+Y  HG ++ A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
            K+   +   +V  W  +ISG +  +++ + L LF  M+   +  D    +S L AC+  
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 371 QALNQ-GRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYL 499
           +A  Q   QIHA+    G+     + N LI+LY++ G VD A L
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKL 168


>ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535253|gb|EEF36930.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score =  245 bits (626), Expect = 2e-63
 Identities = 121/167 (72%), Positives = 143/167 (85%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           QI G+ PN++TYPSILRTCT  GALDLGEQIH+  +KTGF+ NVYVCSVLIDMYAK G+L
Sbjct: 484 QIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKL 543

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
           ++AR IL +L EEDVVSWTA+I+GY QH++  EAL LF EML RGIQSDNIG SSA+SAC
Sbjct: 544 DIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISAC 603

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYLA 502
           A IQAL+QG+QIHAQ+ + GYS DLSIGNAL++LYARCGR+ EA LA
Sbjct: 604 AGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLA 650



 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/164 (37%), Positives = 101/164 (61%)
 Frame = +2

Query: 5   IAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLE 184
           I+G+ P  Y + S+L  C  +   D+GEQ+H LV K GF    YVC+ L+ +Y++ G   
Sbjct: 283 ISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFI 342

Query: 185 LARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACA 364
            A+++  K+  +D VS+ ++ISG  Q   S  ALELF +M +  ++ D + ++S LSACA
Sbjct: 343 SAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACA 402

Query: 365 DIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAY 496
            I++L++G Q+H+ A   G  LD+ I  +L++LY +C  +  A+
Sbjct: 403 SIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAH 446



 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/156 (41%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
 Frame = +2

Query: 14  VEPNEYTYPSILRTCTFLG-ALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           V PNE T  S+LR       A    EQIH  ++  G   +   C+ LID+YAK+G +  A
Sbjct: 184 VNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSA 243

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
           RK+  +L  +D VSW A+IS Y Q+    EA+ LF EM I G+       SS LSACA I
Sbjct: 244 RKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKI 303

Query: 371 QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCG 478
           +  + G Q+HA     G+ L+  + NAL+ LY+R G
Sbjct: 304 ELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLG 339



 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/161 (32%), Positives = 94/161 (58%)
 Frame = +2

Query: 11   GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
            G++ +   + S +  C  + AL  G+QIH     +G+ +++ + + L+ +YA+ GR++ A
Sbjct: 588  GIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEA 647

Query: 191  RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
                 K+  +D +SW A++SG+ Q     EAL++F +M    I++      SA+SA A++
Sbjct: 648  NLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANM 707

Query: 371  QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
              + QG+QIHA     G+  ++ + NALI LYA+CG +D A
Sbjct: 708  ANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGA 748



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/164 (29%), Positives = 86/164 (52%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           Q+  ++P+  T  S+L  C  + +L  GEQ+H+  +K G   ++ +   L+D+Y K   +
Sbjct: 383 QLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDI 442

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
             A K       E+VV W  M+  Y Q +   ++  +F +M I G+  +     S L  C
Sbjct: 443 TTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTC 502

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
               AL+ G QIH+QA   G+  ++ + + LI++YA+ G++D A
Sbjct: 503 TSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIA 546



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/127 (32%), Positives = 78/127 (61%)
 Frame = +2

Query: 8    AGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
            A ++ + +T+ S +     +  +  G+QIH +++KTGFD  + V + LI +YAK G ++ 
Sbjct: 688  ANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDG 747

Query: 188  ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
            A++   ++ E++ +SW AMI+GY QH   +EA+ LF +M   G + +++     +SAC+ 
Sbjct: 748  AKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACSH 807

Query: 368  IQALNQG 388
            +  +N+G
Sbjct: 808  VGLVNEG 814



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           G      TY  +L  C    +    +++H+ ++K GFD+   +C  LI+ Y   G L   
Sbjct: 82  GSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSV 141

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
            K+   +    +++W  ++SG V ++ S   L LF +M+   +  + + ++S L A    
Sbjct: 142 VKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSG 201

Query: 371 Q-ALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
             A     QIHA     G        N LI+LYA+ G +  A
Sbjct: 202 NVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSA 243


>ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494031|gb|AES75234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  239 bits (611), Expect = 1e-61
 Identities = 119/167 (71%), Positives = 139/167 (83%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           QI G+ PN++TYPSIL+TCT LGA DLGEQIHT V+KTGF  NVYV SVLIDMYAKHG+L
Sbjct: 430 QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKL 489

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
           + A KI  +L E DVVSWTAMI+GY QH+   EAL LF EM  +GI+SDNIG +SA+SAC
Sbjct: 490 DHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC 549

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYLA 502
           A IQAL+QGRQIHAQ+C+ GYS DLSIGNAL++LYARCG+V EAY A
Sbjct: 550 AGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAA 596



 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/163 (31%), Positives = 91/163 (55%)
 Frame = +2

Query: 2    QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
            Q  G++ +   + S +  C  + ALD G QIH     +G+  ++ + + L+ +YA+ G++
Sbjct: 531  QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKV 590

Query: 182  ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
              A     ++  +D VSW +++SG+ Q     EAL +F +M   G++ ++    SA+SA 
Sbjct: 591  REAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAA 650

Query: 362  ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDE 490
            A+I  +  G+QIH      GY  +  + NALI LYA+CG +D+
Sbjct: 651  ANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD 693



 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
 Frame = +2

Query: 5   IAGVEPNEYTYPS-------ILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMY 163
           I+G+  N Y   +       +L  CT +   + G+Q+H LV+K GF    YVC+ L+ +Y
Sbjct: 237 ISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLY 296

Query: 164 AKHGRLELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLS 343
           ++ G L  A +I   +++ D VS+ ++ISG  Q      AL LF +M +   + D + ++
Sbjct: 297 SRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVA 356

Query: 344 SALSACADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAY 496
           S LSACA + AL  G+Q H+ A   G + D+ +  +L++LY +C  +  A+
Sbjct: 357 SLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAH 407



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
 Frame = +2

Query: 14  VEPNEYTYPSILRTCTFLG-ALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           VE +E  +  +LR C+    +    EQIH   + +GF+ + ++C+ LID+Y K+G L  A
Sbjct: 159 VEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSA 218

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
           +K+   L   D VSW AMISG  Q+    EA+ LF +++              LSAC  +
Sbjct: 219 KKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKV 264

Query: 371 QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
           +    G+Q+H      G+S +  + NAL+ LY+R G +  A
Sbjct: 265 EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSA 305



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/127 (32%), Positives = 69/127 (54%)
 Frame = +2

Query: 8   AGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
           AG+E N +T+ S +     +  + +G+QIH ++ KTG+D    V + LI +YAK G +  
Sbjct: 634 AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-- 691

Query: 188 ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
                      D +SW +MI+GY QH    EAL+LF +M    +  +++     LSAC+ 
Sbjct: 692 -----------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSH 740

Query: 368 IQALNQG 388
           +  +++G
Sbjct: 741 VGLVDEG 747



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/159 (27%), Positives = 76/159 (47%)
 Frame = +2

Query: 17  EPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELARK 196
           +P+  T  S+L  C  +GAL  G+Q H+  +K G   ++ V   L+D+Y K   ++ A +
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408

Query: 197 ILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADIQA 376
                              Y Q +   ++ ++F +M I GI  +     S L  C  + A
Sbjct: 409 FF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453

Query: 377 LNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
            + G QIH Q    G+  ++ + + LI++YA+ G++D A
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 492


>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  238 bits (608), Expect = 3e-61
 Identities = 119/167 (71%), Positives = 140/167 (83%)
 Frame = +2

Query: 2   QIAGVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRL 181
           Q+ G+ PN++TYPSILRTCT LGAL LGEQIHT V+KTGF  NVYVCSVLIDMYAK+G+L
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514

Query: 182 ELARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC 361
            LA +IL +L E+DVVSWTAMI+GYVQH+M  EAL+LF EM  RGIQ DNIG +SA+SAC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574

Query: 362 ADIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAYLA 502
           A I+AL QG+QIHAQ+   G+  DLSI NALI+LYARCGR+ EAYLA
Sbjct: 575 AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLA 621



 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/159 (38%), Positives = 96/159 (60%)
 Frame = +2

Query: 20  PNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELARKI 199
           P  Y   S+L   T +   +LGEQ+H LV+K GF    YVC+ L+ +Y++  +L  A +I
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERI 318

Query: 200 LGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADIQAL 379
              +   D VS+ ++ISG VQ   S  ALELF +M    ++ D I ++S LSACA + AL
Sbjct: 319 FSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGAL 378

Query: 380 NQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAY 496
           ++G Q+H+ A   G S D+ +  +L++LY++C  V+ A+
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417



 Score =  101 bits (252), Expect = 5e-20
 Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLG-ALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLEL 187
           G+ PN YT+  +L+ C     A +  +Q+H+     GFD +  V ++LID+Y+K+G +E 
Sbjct: 154 GITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIES 213

Query: 188 ARKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACAD 367
           A+K+   +  +D+V+W AMISG  Q+ +  EA+ LF +M    I      LSS LSA   
Sbjct: 214 AKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTK 273

Query: 368 IQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
           IQ    G Q+H     +G+  +  + N L+ LY+R  ++  A
Sbjct: 274 IQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISA 315



 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/162 (31%), Positives = 91/162 (56%)
 Frame = +2

Query: 11   GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
            G++ +   + S +  C  + AL  G+QIH      GF  ++ + + LI +YA+ GR++ A
Sbjct: 559  GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618

Query: 191  RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADI 370
                 K+ +++ +SW +++SG  Q     EAL++FV ML    + +     SA+SA A +
Sbjct: 619  YLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASL 678

Query: 371  QALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEAY 496
              + QG+QIH+     GY  +  + N+LI+LYA+ G + +A+
Sbjct: 679  ANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAW 720



 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/124 (39%), Positives = 74/124 (59%)
 Frame = +2

Query: 17   EPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELARK 196
            E N +TY S +     L  +  G+QIH++V+KTG+D    V + LI +YAK G +  A +
Sbjct: 662  EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721

Query: 197  ILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADIQA 376
                ++E +V+SW AMI+GY QH   +EAL LF EM + GI  +++     LSAC+ I  
Sbjct: 722  EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781

Query: 377  LNQG 388
            + +G
Sbjct: 782  VKEG 785



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/157 (29%), Positives = 83/157 (52%)
 Frame = +2

Query: 14  VEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELAR 193
           ++P+  T  S+L  C  +GAL  G Q+H+  +K G   ++ +   L+D+Y+K   +E A 
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417

Query: 194 KILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSACADIQ 373
           K       E++V W  M+  Y Q +   ++ E+F +M + G+  +     S L  C  + 
Sbjct: 418 KFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477

Query: 374 ALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRV 484
           AL  G QIH      G+ L++ + + LI++YA+ G++
Sbjct: 478 ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
 Frame = +2

Query: 11  GVEPNEYTYPSILRTCTFLGALDLGEQIHTLVVKTGFDQNVYVCSVLIDMYAKHGRLELA 190
           GV  N   Y  +L  C   G+L    ++H  + K+GFD    +   L+D Y +HG    A
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 191 RKILGKLTEEDVVSWTAMISGYVQHEMSLEALELFVEMLIRGIQSDNIGLSSALSAC--A 364
            K+  + +   V SW  MI  +V  + + +   LF  ML  GI  +    +  L AC   
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGG 172

Query: 365 DIQALNQGRQIHAQACVFGYSLDLSIGNALINLYARCGRVDEA 493
           DI A N  +Q+H++   +G+     + N LI+LY++ G ++ A
Sbjct: 173 DI-AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214