BLASTX nr result
ID: Coptis24_contig00036300
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036300 (430 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514918.1| protein with unknown function [Ricinus commu... 132 9e-34 ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267... 129 2e-32 emb|CBI27652.3| unnamed protein product [Vitis vinifera] 129 2e-32 ref|XP_003601788.1| HORMA domain-containing protein [Medicago tr... 127 9e-31 ref|XP_003552781.1| PREDICTED: uncharacterized protein LOC100792... 122 7e-30 >ref|XP_002514918.1| protein with unknown function [Ricinus communis] gi|223545969|gb|EEF47472.1| protein with unknown function [Ricinus communis] Length = 613 Score = 132 bits (332), Expect(2) = 9e-34 Identities = 61/76 (80%), Positives = 67/76 (88%) Frame = -3 Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249 RT+LMKL YYDD+TP DYEPPFFR C+E+EA N W KSPLKMEVGNVNSK FVLALKVKS Sbjct: 173 RTMLMKLLYYDDVTPADYEPPFFRECTEEEAHNPWNKSPLKMEVGNVNSKHFVLALKVKS 232 Query: 248 VLDPCGDENDDLQGDE 201 VLDPC DENDD++ DE Sbjct: 233 VLDPCEDENDDMEEDE 248 Score = 36.2 bits (82), Expect(2) = 9e-34 Identities = 20/46 (43%), Positives = 23/46 (50%) Frame = -2 Query: 138 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1 + S NQY+VAPV K R EDN M+ QLARV W Sbjct: 269 SQSQENQYMVAPVEKERREEDNGMVDQDDTEDPEEDEQQLARVKGW 314 >ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267642 [Vitis vinifera] Length = 662 Score = 129 bits (325), Expect(2) = 2e-32 Identities = 59/76 (77%), Positives = 67/76 (88%) Frame = -3 Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249 RTILMKL YYDD+TP+DYEPPFFR C+E+EA SW K+PLKMEVGNVNSK VLALKVKS Sbjct: 218 RTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKS 277 Query: 248 VLDPCGDENDDLQGDE 201 VLDPC DEN+D+Q D+ Sbjct: 278 VLDPCEDENEDIQNDD 293 Score = 34.7 bits (78), Expect(2) = 2e-32 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 Query: 138 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1 N S +QYIVAPV K++ ED M+ QL+RV DW Sbjct: 314 NLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDW 359 >emb|CBI27652.3| unnamed protein product [Vitis vinifera] Length = 527 Score = 129 bits (325), Expect(2) = 2e-32 Identities = 59/76 (77%), Positives = 67/76 (88%) Frame = -3 Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249 RTILMKL YYDD+TP+DYEPPFFR C+E+EA SW K+PLKMEVGNVNSK VLALKVKS Sbjct: 83 RTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKS 142 Query: 248 VLDPCGDENDDLQGDE 201 VLDPC DEN+D+Q D+ Sbjct: 143 VLDPCEDENEDIQNDD 158 Score = 34.7 bits (78), Expect(2) = 2e-32 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 Query: 138 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1 N S +QYIVAPV K++ ED M+ QL+RV DW Sbjct: 179 NLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDW 224 >ref|XP_003601788.1| HORMA domain-containing protein [Medicago truncatula] gi|355490836|gb|AES72039.1| HORMA domain-containing protein [Medicago truncatula] Length = 613 Score = 127 bits (318), Expect(2) = 9e-31 Identities = 58/75 (77%), Positives = 66/75 (88%) Frame = -3 Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249 RTILMKL YYDD+TP DYEPPFFR CSE+EA++ W K+PLKMEVGNVNSK FVLALKVKS Sbjct: 173 RTILMKLLYYDDVTPSDYEPPFFRGCSEEEANHPWVKNPLKMEVGNVNSKHFVLALKVKS 232 Query: 248 VLDPCGDENDDLQGD 204 VLDPC D+N+ +Q D Sbjct: 233 VLDPCEDDNEGIQDD 247 Score = 31.6 bits (70), Expect(2) = 9e-31 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 Query: 126 GNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1 G+QYIVAP+ K++ EDN I QL R+ +W Sbjct: 272 GDQYIVAPIEKQQEQEDNGEIDEDNTQDPVEDEQQLVRIKEW 313 >ref|XP_003552781.1| PREDICTED: uncharacterized protein LOC100792473 [Glycine max] Length = 662 Score = 122 bits (305), Expect(2) = 7e-30 Identities = 55/75 (73%), Positives = 65/75 (86%) Frame = -3 Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249 RTILMKL YYDD+TP DYEPPFF+ C+++EA + W K+PLKMEVGNVNSK FVLALKVKS Sbjct: 187 RTILMKLLYYDDVTPADYEPPFFKGCTDEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKS 246 Query: 248 VLDPCGDENDDLQGD 204 VLDPC D+N+ +Q D Sbjct: 247 VLDPCEDDNEGIQDD 261 Score = 33.5 bits (75), Expect(2) = 7e-30 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -2 Query: 132 SSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1 + GN+YIVAP+ K + E+N MI QL RV +W Sbjct: 284 TQGNRYIVAPIHKEQEQEENGMIDEDNTQDPVEDEQQLVRVKEW 327