BLASTX nr result

ID: Coptis24_contig00036300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036300
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514918.1| protein with unknown function [Ricinus commu...   132   9e-34
ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267...   129   2e-32
emb|CBI27652.3| unnamed protein product [Vitis vinifera]              129   2e-32
ref|XP_003601788.1| HORMA domain-containing protein [Medicago tr...   127   9e-31
ref|XP_003552781.1| PREDICTED: uncharacterized protein LOC100792...   122   7e-30

>ref|XP_002514918.1| protein with unknown function [Ricinus communis]
           gi|223545969|gb|EEF47472.1| protein with unknown
           function [Ricinus communis]
          Length = 613

 Score =  132 bits (332), Expect(2) = 9e-34
 Identities = 61/76 (80%), Positives = 67/76 (88%)
 Frame = -3

Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249
           RT+LMKL YYDD+TP DYEPPFFR C+E+EA N W KSPLKMEVGNVNSK FVLALKVKS
Sbjct: 173 RTMLMKLLYYDDVTPADYEPPFFRECTEEEAHNPWNKSPLKMEVGNVNSKHFVLALKVKS 232

Query: 248 VLDPCGDENDDLQGDE 201
           VLDPC DENDD++ DE
Sbjct: 233 VLDPCEDENDDMEEDE 248



 Score = 36.2 bits (82), Expect(2) = 9e-34
 Identities = 20/46 (43%), Positives = 23/46 (50%)
 Frame = -2

Query: 138 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1
           + S  NQY+VAPV K R  EDN M+             QLARV  W
Sbjct: 269 SQSQENQYMVAPVEKERREEDNGMVDQDDTEDPEEDEQQLARVKGW 314


>ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267642 [Vitis vinifera]
          Length = 662

 Score =  129 bits (325), Expect(2) = 2e-32
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = -3

Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249
           RTILMKL YYDD+TP+DYEPPFFR C+E+EA  SW K+PLKMEVGNVNSK  VLALKVKS
Sbjct: 218 RTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKS 277

Query: 248 VLDPCGDENDDLQGDE 201
           VLDPC DEN+D+Q D+
Sbjct: 278 VLDPCEDENEDIQNDD 293



 Score = 34.7 bits (78), Expect(2) = 2e-32
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -2

Query: 138 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1
           N S  +QYIVAPV K++  ED  M+             QL+RV DW
Sbjct: 314 NLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDW 359


>emb|CBI27652.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  129 bits (325), Expect(2) = 2e-32
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = -3

Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249
           RTILMKL YYDD+TP+DYEPPFFR C+E+EA  SW K+PLKMEVGNVNSK  VLALKVKS
Sbjct: 83  RTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKS 142

Query: 248 VLDPCGDENDDLQGDE 201
           VLDPC DEN+D+Q D+
Sbjct: 143 VLDPCEDENEDIQNDD 158



 Score = 34.7 bits (78), Expect(2) = 2e-32
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -2

Query: 138 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1
           N S  +QYIVAPV K++  ED  M+             QL+RV DW
Sbjct: 179 NLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDW 224


>ref|XP_003601788.1| HORMA domain-containing protein [Medicago truncatula]
           gi|355490836|gb|AES72039.1| HORMA domain-containing
           protein [Medicago truncatula]
          Length = 613

 Score =  127 bits (318), Expect(2) = 9e-31
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = -3

Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249
           RTILMKL YYDD+TP DYEPPFFR CSE+EA++ W K+PLKMEVGNVNSK FVLALKVKS
Sbjct: 173 RTILMKLLYYDDVTPSDYEPPFFRGCSEEEANHPWVKNPLKMEVGNVNSKHFVLALKVKS 232

Query: 248 VLDPCGDENDDLQGD 204
           VLDPC D+N+ +Q D
Sbjct: 233 VLDPCEDDNEGIQDD 247



 Score = 31.6 bits (70), Expect(2) = 9e-31
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 126 GNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1
           G+QYIVAP+ K++  EDN  I             QL R+ +W
Sbjct: 272 GDQYIVAPIEKQQEQEDNGEIDEDNTQDPVEDEQQLVRIKEW 313


>ref|XP_003552781.1| PREDICTED: uncharacterized protein LOC100792473 [Glycine max]
          Length = 662

 Score =  122 bits (305), Expect(2) = 7e-30
 Identities = 55/75 (73%), Positives = 65/75 (86%)
 Frame = -3

Query: 428 RTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSPLKMEVGNVNSKRFVLALKVKS 249
           RTILMKL YYDD+TP DYEPPFF+ C+++EA + W K+PLKMEVGNVNSK FVLALKVKS
Sbjct: 187 RTILMKLLYYDDVTPADYEPPFFKGCTDEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKS 246

Query: 248 VLDPCGDENDDLQGD 204
           VLDPC D+N+ +Q D
Sbjct: 247 VLDPCEDDNEGIQDD 261



 Score = 33.5 bits (75), Expect(2) = 7e-30
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 132 SSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXQLARVTDW 1
           + GN+YIVAP+ K +  E+N MI             QL RV +W
Sbjct: 284 TQGNRYIVAPIHKEQEQEENGMIDEDNTQDPVEDEQQLVRVKEW 327


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