BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036291
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]    85   5e-15
emb|CBI31012.3| unnamed protein product [Vitis vinifera]               76   2e-12
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]       72   4e-11
ref|XP_003556821.1| PREDICTED: uncharacterized protein LOC100783...    69   3e-10
emb|CBI20118.3| unnamed protein product [Vitis vinifera]               65   4e-09

>emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
          Length = 764

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
 Frame = -3

Query: 414 LVQFILNSLFAKYGHFQILYNTIKDKWNVNELANILI*EEGRLKQQNSHVVHFMVEXXXX 235
           L+QFILNS   +YG FQI YNTIKDKWNVNELA++ + EE R KQQ  H +H + +    
Sbjct: 165 LIQFILNSFPLQYGSFQIHYNTIKDKWNVNELASMPVQEETRPKQQGHHSIHLISKGAK- 223

Query: 234 XXXXXXXXXXXKRGPSSQNEPNQ--PAPKKGRKDDQCHFCKKEWTLSERLHKTQSLVRKE 61
                         P   N P Q   A ++ +   +C FCKK   +    HK ++   K+
Sbjct: 224 --------------PPKINGPPQGIEAHERRQNSIKCRFCKKFGHVQRDCHKRRAWFEKK 269

Query: 60  G*ALGFRMFRIK-FN*SSF 7
           G +  FR  R   F  SSF
Sbjct: 270 GYSFSFRNRRFSLFKNSSF 288


>emb|CBI31012.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
 Frame = -3

Query: 414 LVQFILNSLFAKYGHFQILYNTIKDKWNVNELANILI*EEGRLKQQNSHVVHFMVEXXXX 235
           LV FILN+L  +YG F+I YNT KDKW++NEL  + + EEGRL  +    V  + +    
Sbjct: 198 LVHFILNTLPPQYGPFKISYNTHKDKWSINELMTMCVQEEGRLMMEQGESVMLVTQ---- 253

Query: 234 XXXXXXXXXXXKRGPSSQNEPNQPAPKKG-RKDDQCHFCKKEWTLSERLHKTQSLVRKEG 58
                       +  +SQ    Q +PK   +KD++C FCKK+  + ++  K Q+ + K+G
Sbjct: 254 ------RKGKKGKSQASQKGKQQISPKSDIKKDEKCFFCKKKGHVKKKCLKFQNWLEKKG 307



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = -1

Query: 155 RKDERMTSAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSN 3
           +KDE+       KK GH +K C+K + W EKKG P +F+C+ESN++ V +N
Sbjct: 278 KKDEK---CFFCKKKGHVKKKCLKFQNWLEKKGNPTSFICYESNMVNVNTN 325


>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
          Length = 931

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = -1

Query: 158 QRKDERMTSAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSN 3
           +R+ ++       KK+GHF+KDC+KRKAWFEKKGK ++FVC E NLIEVP+N
Sbjct: 89  ERQIKKEIKCFFCKKTGHFKKDCLKRKAWFEKKGKHYSFVCSELNLIEVPNN 140



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
 Frame = -3

Query: 414 LVQFILNSLFAKYGHFQILYNTIKDKWNVNELANILI*EEGRLKQQNSHVVHFMVEXXXX 235
           LVQFI+NSL  ++  FQ+ YNTIKDKWN  EL  +L+ EEGRLK     V + +      
Sbjct: 8   LVQFIMNSLPNEFSQFQVNYNTIKDKWNYKELKAMLVQEEGRLKMMKEQVANLV------ 61

Query: 234 XXXXXXXXXXXKRGPSSQNEPNQPAPKKG-----------RKDDQCHFCKKEWTLSERLH 88
                       R  SS+  PN     KG           +K+ +C FCKK     +   
Sbjct: 62  ---------GLNRTSSSKGTPNAKVKGKGKSFIKGPERQIKKEIKCFFCKKTGHFKKDCL 112

Query: 87  KTQSLVRKEG 58
           K ++   K+G
Sbjct: 113 KRKAWFEKKG 122


>ref|XP_003556821.1| PREDICTED: uncharacterized protein LOC100783344 [Glycine max]
          Length = 113

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -3

Query: 357 YNTIKDKWNVNELANILI*EEGRLKQQNSHVVHFMV-EXXXXXXXXXXXXXXXKRGPSSQ 181
           YNTIKDKWNV+EL ++L+ EE RLK Q SH+VH++  +                +GP   
Sbjct: 3   YNTIKDKWNVHELHSMLVQEEMRLKNQGSHLVHYVSHQGNQGARKKFVKKHDKGKGPLKI 62

Query: 180 NEPNQPAPKKGRKDDQCHFCKKEWTLSERLHKTQSLVRKEG 58
           N  ++   KK  K + CHFC K     +   K +S   K+G
Sbjct: 63  NNNSKQIQKKTSKRNNCHFCGKSGHFQKDCPKRKSWFEKKG 103


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = -1

Query: 158 QRKDERMT-SAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSN 3
           Q  D + T S     K GH +KDCIKRKAWFEK+G   +FVC+ESNL EVPSN
Sbjct: 609 QNHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSN 661



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/124 (30%), Positives = 59/124 (47%)
 Frame = -3

Query: 414 LVQFILNSLFAKYGHFQILYNTIKDKWNVNELANILI*EEGRLKQQNSHVVHFMVEXXXX 235
           LVQF+LNSL +++  F+I YNT  D+WN+NEL +  I EE RL+Q+  ++   +      
Sbjct: 527 LVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCIQEEVRLRQEGHNLALAVTHGVTK 586

Query: 234 XXXXXXXXXXXKRGPSSQNEPNQPAPKKGRKDDQCHFCKKEWTLSERLHKTQSLVRKEG* 55
                          S   E +Q     G+    C+FC K+  + +   K ++   K G 
Sbjct: 587 KKGKFKKGRNFPPKKSGPGEGSQ--NHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGI 644

Query: 54  ALGF 43
            L F
Sbjct: 645 NLSF 648