BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036277
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    60   1e-07
emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]    51   3e-07
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    58   7e-07
gb|ABN08570.1| WW/Rsp5/WWP [Medicago truncatula]                       57   1e-06
emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]    49   1e-06

>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = -1

Query: 214 IAGWKSKLLSQAARTVLIKSISSAIHVFHMNTFLLPNSMTSTLNAIPRDFWWGGK 50
           + GW+SKLLSQA + +LIK +  AI  + M+TFLLP S++  L  +   FWWG K
Sbjct: 177 LQGWQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPK 231


>emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
          Length = 2009

 Score = 50.8 bits (120), Expect(2) = 3e-07
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = -1

Query: 214  IAGWKSKLLSQAARTVLIKSISSAIHVFHMNTFLLPNSMTSTLNAIPRDFWWGG 53
            +A WK + LS+  R  LIKS  ++I ++ M+ F +P S+   L  + RDF WGG
Sbjct: 1688 LARWKRQYLSKGGRITLIKSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWGG 1741



 Score = 28.1 bits (61), Expect(2) = 3e-07
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 75   RETFGGGGNTGKKHPLYLKSWSFIC 1
            R+   GGGNTG+K  ++L +W  +C
Sbjct: 1735 RDFLWGGGNTGRK--IHLVNWKVVC 1757


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
 Frame = -1

Query: 214  IAGWKSKLLSQAARTVLIKSISSAIHVFHMNTFLLPNSMTSTLNAIPRDFWWG-----GK 50
            + GWK   LSQA + VLIK++++AI  + M  F  P+++   LN I  DFWWG     G 
Sbjct: 1385 VKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWGNVDTRGI 1444

Query: 49   YW*KTSFI 26
            +W    F+
Sbjct: 1445 HWKSWDFL 1452


>gb|ABN08570.1| WW/Rsp5/WWP [Medicago truncatula]
          Length = 265

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/70 (38%), Positives = 40/70 (57%)
 Frame = -1

Query: 214 IAGWKSKLLSQAARTVLIKSISSAIHVFHMNTFLLPNSMTSTLNAIPRDFWWGGKYW*KT 35
           I  W S+ LSQA R +LIKS+  +I  + M+TF+LPNS+ + +  +   FWWG       
Sbjct: 38  INSWSSRCLSQAGREILIKSVLQSIPSYLMSTFMLPNSLINEIEKMLNAFWWGHGNGSNR 97

Query: 34  SFIFKELELY 5
              FK L+ +
Sbjct: 98  GMCFKSLKAF 107


>emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]
          Length = 1416

 Score = 48.9 bits (115), Expect(2) = 1e-06
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -1

Query: 214  IAGWKSKLLSQAARTVLIKSISSAIHVFHMNTFLLPNSMTSTLNAIPRDFWWGG 53
            +A WK + LS+  R  LI S  ++I ++ M+ F +P S+   L  + RDF WGG
Sbjct: 1160 LAXWKRQYLSKGGRITLIXSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWGG 1213



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 75   RETFGGGGNTGKKHPLYLKSWSFIC 1
            R+   GGGNTG+K  ++L +W  +C
Sbjct: 1207 RDFLWGGGNTGRK--IHLVNWKVVC 1229