BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036274
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]   125   3e-27
ref|XP_003597542.1| Pentatricopeptide repeat-containing protein ...   123   2e-26
ref|XP_004147301.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selag...    97   1e-18

>ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 602

 Score =  126 bits (316), Expect = 2e-27
 Identities = 55/88 (62%), Positives = 73/88 (82%)
 Frame = +2

Query: 2   LIPELDQYACMVDLYGKTGQLTKAKKTMDEMPFEPNVVMLSSFLGSCRVYGEVQLGGEAA 181
           L+P+LDQYAC+VDLY + G L KAK+ M+ +P EPN VM  SFL SC++YGE +LG EAA
Sbjct: 438 LVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAA 497

Query: 182 NQLFKMDPCSAAPYVTLANIYAEAGMWN 265
           ++LFKM+PCS APYV +A+IYA+AG+W+
Sbjct: 498 DKLFKMEPCSTAPYVAMASIYAQAGLWS 525


>emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
          Length = 1817

 Score =  125 bits (315), Expect = 3e-27
 Identities = 55/88 (62%), Positives = 72/88 (81%)
 Frame = +2

Query: 2    LIPELDQYACMVDLYGKTGQLTKAKKTMDEMPFEPNVVMLSSFLGSCRVYGEVQLGGEAA 181
            L+P+LDQYAC+VDLY + G L KAK+ M+  P EPN VM  SFL SC++YGE +LG EAA
Sbjct: 1653 LVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAA 1712

Query: 182  NQLFKMDPCSAAPYVTLANIYAEAGMWN 265
            ++LFKM+PCS APYV +A+IYA+AG+W+
Sbjct: 1713 DKLFKMEPCSTAPYVAMASIYAQAGLWS 1740


>ref|XP_003597542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355486590|gb|AES67793.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 280

 Score =  123 bits (308), Expect = 2e-26
 Identities = 51/88 (57%), Positives = 71/88 (80%)
 Frame = +2

Query: 2   LIPELDQYACMVDLYGKTGQLTKAKKTMDEMPFEPNVVMLSSFLGSCRVYGEVQLGGEAA 181
           L P++D YAC++DLY + G L KA   M+EMP++PN ++ SSFL +C++YG+V+LG EAA
Sbjct: 106 LSPDIDIYACLIDLYARNGNLRKATDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAA 165

Query: 182 NQLFKMDPCSAAPYVTLANIYAEAGMWN 265
           NQL KM+PC+AAPY+TLA+IY   G+WN
Sbjct: 166 NQLIKMEPCNAAPYLTLAHIYTTKGLWN 193


>ref|XP_004147301.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449501263|ref|XP_004161322.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 265

 Score =  110 bits (275), Expect = 1e-22
 Identities = 47/87 (54%), Positives = 70/87 (80%)
 Frame = +2

Query: 2   LIPELDQYACMVDLYGKTGQLTKAKKTMDEMPFEPNVVMLSSFLGSCRVYGEVQLGGEAA 181
           L P++D YAC++DLY + G + KAK+ M++MP+E N V+L S LG+C+V+ EV+LG E A
Sbjct: 106 LDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGREVA 165

Query: 182 NQLFKMDPCSAAPYVTLANIYAEAGMW 262
           ++L +MDP +AAPY+TLA+I A+AG+W
Sbjct: 166 HRLIEMDPSNAAPYLTLAHISAKAGLW 192


>ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
           gi|300163184|gb|EFJ29795.1| hypothetical protein
           SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/87 (47%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   LIPELDQYACMVDLYGKTGQLTKAKKTMDEMPFEPNVVMLSSFLGSCRVYGEVQLGGEAA 181
           L P  D +A MVDL G++G+L  AK+ ++ MPFEP+ V   +FL +CR++G+++LG  AA
Sbjct: 577 LAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAA 636

Query: 182 NQLFKMDPCSAAPYVTLANIYAEAGMW 262
            +++++DP S APY+ ++NIYA  GMW
Sbjct: 637 ERVYELDPSSTAPYIAMSNIYAAHGMW 663